rs2674047

Homo sapiens
T>A
None
Check p-value
SNV (Single Nucleotide Variation)
A=0288 (8645/29926,GnomAD)
A=0304 (8852/29116,TOPMED)
A=0353 (1766/5008,1000G)
A=0307 (1183/3854,ALSPAC)
A=0314 (1164/3708,TWINSUK)
chr2:59541550 (GRCh38.p7) (2p16.1)
AD
GWASdb2
1   publication(s)
See rs on genome
25 Enhancers around
0 Promoter around

Genomic Coordinates

Sequence Name Change(s)
GRCh38.p7 chr 2NC_000002.12:g.59541550T>A
GRCh37.p13 chr 2NC_000002.11:g.59768685T>A

Population Frequency

Study Population Group Sample # Ref Allele Alt Allele
1000GenomesAfricanSub1322T=0.743A=0.257
1000GenomesAmericanSub694T=0.600A=0.400
1000GenomesEast AsianSub1008T=0.477A=0.523
1000GenomesEuropeSub1006T=0.688A=0.312
1000GenomesGlobalStudy-wide5008T=0.647A=0.353
1000GenomesSouth AsianSub978T=0.680A=0.320
The Avon Longitudinal Study of Parents and ChildrenPARENT AND CHILD COHORTStudy-wide3854T=0.693A=0.307
The Genome Aggregation DatabaseAfricanSub8716T=0.738A=0.262
The Genome Aggregation DatabaseAmericanSub834T=0.590A=0.410
The Genome Aggregation DatabaseEast AsianSub1618T=0.469A=0.531
The Genome Aggregation DatabaseEuropeSub18456T=0.726A=0.273
The Genome Aggregation DatabaseGlobalStudy-wide29926T=0.711A=0.288
The Genome Aggregation DatabaseOtherSub302T=0.660A=0.340
Trans-Omics for Precision MedicineGlobalStudy-wide29116T=0.696A=0.304
UK 10K study - TwinsTWIN COHORTStudy-wide3708T=0.686A=0.314
PMID Title Author Journal
23743675A meta-analysis of two genome-wide association studies to identify novel loci for maximum number of alcoholic drinks.Kapoor MHum Genet

P-Value

SNP ID p-value Traits Study
rs26740476.6E-05alcohol consumption23743675

eQTL of rs2674047 in Brain tissues (GTEx Analysis Release V7)

Position (v37) eGene GeneID Variant p-value TSS Tissue
There is no eQTL annotation for this SNP

meQTL of rs2674047 in Fetal Brain

Probe ID Position Gene beta p-value
There is no meQTL annotation for this SNP

Genomic View

Chromatin Interaction

There is no significant Hi-C chromatin interaction data for this SNP.

Enhancer Annotation (GRCh37.p13)

Chromosome Start End Region Distance ( -/+ : Up/Downstream )
chr25981223659812346E07043551
chr25981267359813110E07043988
chr25981330659813694E07044621
chr25981267359813110E07143988
chr25981267359813110E07243988
chr25981267359813110E07443988
chr25979357059793733E08124885
chr25979377559794244E08125090
chr25979429459794429E08125609
chr25979448259795096E08125797
chr25979531859795414E08126633
chr25979556659795892E08126881
chr25979831859798751E08129633
chr25979946259799668E08130777
chr25981267359813110E08143988
chr25979357059793733E08224885
chr25979377559794244E08225090
chr25979429459794429E08225609
chr25979448259795096E08225797
chr25979531859795414E08226633
chr25981223659812346E08243551
chr25981267359813110E08243988
chr25981330659813694E08244621
chr25981540359815727E08246718
chr25981573359815897E08247048