rs2766692

Homo sapiens
A>G
None
Check p-value
SNV (Single Nucleotide Variation)
A==0277 (8302/29914,GnomAD)
A==0276 (8044/29118,TOPMED)
A==0366 (1831/5008,1000G)
A==0297 (1144/3854,ALSPAC)
A==0304 (1126/3708,TWINSUK)
chr14:100217855 (GRCh38.p7) (14q32.2)
AD
GWASCatalog
2   publication(s)
See rs on genome
206 Enhancers around
19 Promoters around

Genomic Coordinates

Sequence Name Change(s)
GRCh38.p7 chr 14NC_000014.9:g.100217855A>G
GRCh37.p13 chr 14NC_000014.8:g.100684192A>G

Population Frequency

Study Population Group Sample # Ref Allele Alt Allele
1000GenomesAfricanSub1322A=0.268G=0.732
1000GenomesAmericanSub694A=0.350G=0.650
1000GenomesEast AsianSub1008A=0.395G=0.605
1000GenomesEuropeSub1006A=0.260G=0.740
1000GenomesGlobalStudy-wide5008A=0.366G=0.634
1000GenomesSouth AsianSub978A=0.590G=0.410
The Avon Longitudinal Study of Parents and ChildrenPARENT AND CHILD COHORTStudy-wide3854A=0.297G=0.703
The Genome Aggregation DatabaseAfricanSub8702A=0.261G=0.739
The Genome Aggregation DatabaseAmericanSub830A=0.410G=0.590
The Genome Aggregation DatabaseEast AsianSub1614A=0.341G=0.659
The Genome Aggregation DatabaseEuropeSub18468A=0.273G=0.726
The Genome Aggregation DatabaseGlobalStudy-wide29914A=0.277G=0.722
The Genome Aggregation DatabaseOtherSub300A=0.280G=0.720
Trans-Omics for Precision MedicineGlobalStudy-wide29118A=0.276G=0.723
UK 10K study - TwinsTWIN COHORTStudy-wide3708A=0.304G=0.696
PMID Title Author Journal
22554406Family-based genome-wide association study of frontal theta oscillations identifies potassium channel gene KCNJ6.Kang SJGenes Brain Behav
23409076Gene set of nuclear-encoded mitochondrial regulators is enriched for common inherited variation in obesity.Knoll NPLoS One

P-Value

SNP ID p-value Traits Study
rs27666922E-06alcohol dependence22554406

eQTL of rs2766692 in Brain tissues (GTEx Analysis Release V7)

Position (v37) eGene GeneID Variant p-value TSS Tissue
There is no eQTL annotation for this SNP

meQTL of rs2766692 in Fetal Brain

Probe ID Position Gene beta p-value
cg14866419chr14:100704911YY10.003586602813418089.6837e-10

Genomic View

Chromatin Interaction

There is no significant Hi-C chromatin interaction data for this SNP.

Enhancer Annotation (GRCh37.p13)

Chromosome Start End Region Distance ( -/+ : Up/Downstream )
chr14100709165100709215E06724973
chr14100709262100709312E06725070
chr14100709487100709537E06725295
chr14100709562100709622E06725370
chr14100711546100711671E06727354
chr14100711686100711790E06727494
chr14100712109100712161E06727917
chr14100712224100712326E06728032
chr14100712392100712918E06728200
chr14100713041100713600E06728849
chr14100716996100717046E06732804
chr14100717224100717287E06733032
chr14100717470100717777E06733278
chr14100717867100717950E06733675
chr14100718056100718106E06733864
chr14100722348100722398E06738156
chr14100723932100723972E06739740
chr14100727930100728037E06743738
chr14100728043100728097E06743851
chr14100728164100728268E06743972
chr14100728863100728976E06744671
chr14100729044100729101E06744852
chr14100729120100729202E06744928
chr14100729423100729477E06745231
chr14100729572100729709E06745380
chr14100685637100686132E0681445
chr14100702423100702594E06818231
chr14100702993100703133E06818801
chr14100708540100708647E06824348
chr14100708788100708851E06824596
chr14100709011100709061E06824819
chr14100709165100709215E06824973
chr14100709262100709312E06825070
chr14100709487100709537E06825295
chr14100709562100709622E06825370
chr14100711182100711280E06826990
chr14100711546100711671E06827354
chr14100711686100711790E06827494
chr14100712109100712161E06827917
chr14100712224100712326E06828032
chr14100712392100712918E06828200
chr14100713041100713600E06828849
chr14100713771100713825E06829579
chr14100713982100714221E06829790
chr14100717470100717777E06833278
chr14100729044100729101E06844852
chr14100729120100729202E06844928
chr14100729423100729477E06845231
chr14100729572100729709E06845380
chr14100730081100730131E06845889
chr14100730171100730236E06845979
chr14100685637100686132E0691445
chr14100702993100703133E06918801
chr14100708540100708647E06924348
chr14100709487100709537E06925295
chr14100709562100709622E06925370
chr14100709676100709726E06925484
chr14100712392100712918E06928200
chr14100713041100713600E06928849
chr14100713771100713825E06929579
chr14100713982100714221E06929790
chr14100717470100717777E06933278
chr14100717867100717950E06933675
chr14100718056100718106E06933864
chr14100718643100718693E06934451
chr14100727930100728037E06943738
chr14100728043100728097E06943851
chr14100728164100728268E06943972
chr14100728863100728976E06944671
chr14100729044100729101E06944852
chr14100729120100729202E06944928
chr14100686972100687035E0702780
chr14100687257100687307E0703065
chr14100700854100701262E07016662
chr14100701490100701540E07017298
chr14100708540100708647E07024348
chr14100708788100708851E07024596
chr14100709011100709061E07024819
chr14100712392100712918E07028200
chr14100702280100702334E07118088
chr14100702423100702594E07118231
chr14100702993100703133E07118801
chr14100709011100709061E07124819
chr14100709165100709215E07124973
chr14100709262100709312E07125070
chr14100709487100709537E07125295
chr14100709562100709622E07125370
chr14100709676100709726E07125484
chr14100709777100709864E07125585
chr14100709963100710017E07125771
chr14100712392100712918E07128200
chr14100713041100713600E07128849
chr14100713771100713825E07129579
chr14100713982100714221E07129790
chr14100715757100715837E07131565
chr14100716650100716704E07132458
chr14100716783100716843E07132591
chr14100716996100717046E07132804
chr14100717224100717287E07133032
chr14100717470100717777E07133278
chr14100717867100717950E07133675
chr14100718056100718106E07133864
chr14100727930100728037E07143738
chr14100728043100728097E07143851
chr14100728164100728268E07143972
chr14100728863100728976E07144671
chr14100729044100729101E07144852
chr14100729120100729202E07144928
chr14100729423100729477E07145231
chr14100729572100729709E07145380
chr14100732304100732358E07148112
chr14100732583100732633E07148391
chr14100732775100732833E07148583
chr14100732995100733061E07148803
chr14100733328100733407E07149136
chr14100733596100733636E07149404
chr14100658263100658507E072-25685
chr14100685637100686132E0721445
chr14100702993100703133E07218801
chr14100708540100708647E07224348
chr14100708788100708851E07224596
chr14100709011100709061E07224819
chr14100709165100709215E07224973
chr14100709262100709312E07225070
chr14100711686100711790E07227494
chr14100712224100712326E07228032
chr14100712392100712918E07228200
chr14100713041100713600E07228849
chr14100713771100713825E07229579
chr14100713982100714221E07229790
chr14100715757100715837E07231565
chr14100717470100717777E07233278
chr14100728863100728976E07244671
chr14100729044100729101E07244852
chr14100729120100729202E07244928
chr14100729423100729477E07245231
chr14100729572100729709E07245380
chr14100732583100732633E07248391
chr14100732775100732833E07248583
chr14100732995100733061E07248803
chr14100709011100709061E07324819
chr14100709165100709215E07324973
chr14100709262100709312E07325070
chr14100709487100709537E07325295
chr14100709562100709622E07325370
chr14100712392100712918E07328200
chr14100713041100713600E07328849
chr14100713771100713825E07329579
chr14100713982100714221E07329790
chr14100716650100716704E07332458
chr14100716783100716843E07332591
chr14100716996100717046E07332804
chr14100717224100717287E07333032
chr14100717470100717777E07333278
chr14100717867100717950E07333675
chr14100718056100718106E07333864
chr14100658263100658507E074-25685
chr14100702993100703133E07418801
chr14100712109100712161E07427917
chr14100712224100712326E07428032
chr14100712392100712918E07428200
chr14100713041100713600E07428849
chr14100713771100713825E07429579
chr14100713982100714221E07429790
chr14100716650100716704E07432458
chr14100716783100716843E07432591
chr14100716996100717046E07432804
chr14100717224100717287E07433032
chr14100717470100717777E07433278
chr14100717867100717950E07433675
chr14100727930100728037E07443738
chr14100728043100728097E07443851
chr14100728164100728268E07443972
chr14100728863100728976E07444671
chr14100729044100729101E07444852
chr14100729120100729202E07444928
chr14100729423100729477E07445231
chr14100732995100733061E07448803
chr14100733328100733407E07449136
chr14100702280100702334E08118088
chr14100702423100702594E08118231
chr14100702993100703133E08118801
chr14100711546100711671E08127354
chr14100711686100711790E08127494
chr14100712109100712161E08127917
chr14100712224100712326E08128032
chr14100712392100712918E08128200
chr14100713041100713600E08128849
chr14100713771100713825E08129579
chr14100702423100702594E08218231
chr14100702993100703133E08218801
chr14100708540100708647E08224348
chr14100708788100708851E08224596
chr14100709011100709061E08224819
chr14100709165100709215E08224973
chr14100709262100709312E08225070
chr14100709487100709537E08225295
chr14100709562100709622E08225370
chr14100709676100709726E08225484
chr14100709777100709864E08225585
chr14100709963100710017E08225771
chr14100710038100710082E08225846
chr14100710181100710261E08225989
chr14100712392100712918E08228200
chr14100713041100713600E08228849
chr14100713771100713825E08229579










Promoter Annotation (GRCh37.p13)

Chromosome Start End Region Distance(-/+:Up/Downstream)
chr14100679900100682066E067-2126
chr14100703520100708039E06719328
chr14100679900100682066E068-2126
chr14100703520100708039E06819328
chr14100679900100682066E069-2126
chr14100703520100708039E06919328
chr14100679900100682066E070-2126
chr14100703520100708039E07019328
chr14100679900100682066E071-2126
chr14100703520100708039E07119328
chr14100679900100682066E072-2126
chr14100703520100708039E07219328
chr14100679900100682066E073-2126
chr14100703520100708039E07319328
chr14100679900100682066E074-2126
chr14100703520100708039E07419328
chr14100703520100708039E08119328
chr14100679900100682066E082-2126
chr14100703520100708039E08219328