Sequence Name | Change(s) |
---|---|
GRCh38.p7 chr 10 | NC_000010.11:g.80155380T>C |
GRCh37.p13 chr 10 | NC_000010.10:g.81915136T>C |
Molecule type | Change | Amino acid[Codon] | SO Term |
---|---|---|---|
ANXA11 transcript variant a | NM_001157.2:c. | N/A | 3 Prime UTR Variant |
ANXA11 transcript variant b | NM_145868.1:c. | N/A | 3 Prime UTR Variant |
ANXA11 transcript variant c | NM_145869.1:c. | N/A | 3 Prime UTR Variant |
ANXA11 transcript variant d | NM_001278407.1:c. | N/A | 3 Prime UTR Variant |
ANXA11 transcript variant e | NM_001278408.1:c. | N/A | 3 Prime UTR Variant |
ANXA11 transcript variant f | NM_001278409.1:c. | N/A | 3 Prime UTR Variant |
ANXA11 transcript variant X1 | XM_005269741.4:c. | N/A | 3 Prime UTR Variant |
ANXA11 transcript variant X6 | XM_011539736.2:c. | N/A | 3 Prime UTR Variant |
ANXA11 transcript variant X3 | XM_005269742.1:c. | N/A | Genic Downstream Transcript Variant |
ANXA11 transcript variant X2 | XM_006717813.1:c. | N/A | Genic Downstream Transcript Variant |
ANXA11 transcript variant X4 | XM_006717814.3:c. | N/A | Genic Downstream Transcript Variant |
ANXA11 transcript variant X3 | XM_011539735.1:c. | N/A | Genic Downstream Transcript Variant |
Study | Population | Group | Sample # | Ref Allele | Alt Allele |
---|---|---|---|---|---|
1000Genomes | African | Sub | 1322 | T=0.334 | C=0.666 |
1000Genomes | American | Sub | 694 | T=0.110 | C=0.890 |
1000Genomes | East Asian | Sub | 1008 | T=0.003 | C=0.997 |
1000Genomes | Europe | Sub | 1006 | T=0.101 | C=0.899 |
1000Genomes | Global | Study-wide | 5008 | T=0.134 | C=0.866 |
1000Genomes | South Asian | Sub | 978 | T=0.050 | C=0.950 |
The Avon Longitudinal Study of Parents and Children | PARENT AND CHILD COHORT | Study-wide | 3854 | T=0.112 | C=0.888 |
The Genome Aggregation Database | African | Sub | 8704 | T=0.282 | C=0.718 |
The Genome Aggregation Database | American | Sub | 838 | T=0.080 | C=0.920 |
The Genome Aggregation Database | East Asian | Sub | 1620 | T=0.001 | C=0.999 |
The Genome Aggregation Database | Europe | Sub | 18412 | T=0.112 | C=0.887 |
The Genome Aggregation Database | Global | Study-wide | 29876 | T=0.155 | C=0.844 |
The Genome Aggregation Database | Other | Sub | 302 | T=0.230 | C=0.770 |
Trans-Omics for Precision Medicine | Global | Study-wide | 29118 | T=0.185 | C=0.814 |
UK 10K study - Twins | TWIN COHORT | Study-wide | 3708 | T=0.112 | C=0.888 |
PMID | Title | Author | Journal |
---|---|---|---|
21529783 | A quantitative-trait genome-wide association study of alcoholism risk in the community: findings and implications. | Heath AC | Biol Psychiatry |
23151485 | Association of ANXA11 genetic variation with sarcoidosis in African Americans and European Americans. | Levin AM | Genes Immun |
21368773 | Peripheral blood gene expression profiles in metabolic syndrome, coronary artery disease and type 2 diabetes. | Grayson BL | Genes Immun |
SNP ID | p-value | Traits | Study |
---|---|---|---|
rs2789686 | 1.4E-05 | alcoholism (heaviness of drinking) | 21529783 |
Position (v37) | eGene | GeneID | Variant | p-value | TSS | Tissue | |
---|---|---|---|---|---|---|---|
There is no eQTL annotation for this SNP |
Probe ID | Position | Gene | beta | p-value | |||
---|---|---|---|---|---|---|---|
There is no meQTL annotation for this SNP |
There is no significant Hi-C chromatin interaction data for this SNP.
Chromosome | Start | End | Region | Distance ( -/+ : Up/Downstream ) |
---|---|---|---|---|
chr10 | 81886616 | 81886989 | E067 | -28147 |
chr10 | 81896459 | 81897501 | E067 | -17635 |
chr10 | 81916010 | 81916266 | E067 | 874 |
chr10 | 81917862 | 81919298 | E067 | 2726 |
chr10 | 81927188 | 81927238 | E067 | 12052 |
chr10 | 81927303 | 81927502 | E067 | 12167 |
chr10 | 81927549 | 81927666 | E067 | 12413 |
chr10 | 81932325 | 81932406 | E067 | 17189 |
chr10 | 81932429 | 81932542 | E067 | 17293 |
chr10 | 81932556 | 81932743 | E067 | 17420 |
chr10 | 81932771 | 81933025 | E067 | 17635 |
chr10 | 81933041 | 81933121 | E067 | 17905 |
chr10 | 81933274 | 81933651 | E067 | 18138 |
chr10 | 81946964 | 81948227 | E067 | 31828 |
chr10 | 81948376 | 81948840 | E067 | 33240 |
chr10 | 81957136 | 81957343 | E067 | 42000 |
chr10 | 81957371 | 81957411 | E067 | 42235 |
chr10 | 81957521 | 81957603 | E067 | 42385 |
chr10 | 81957710 | 81958067 | E067 | 42574 |
chr10 | 81958101 | 81958624 | E067 | 42965 |
chr10 | 81961946 | 81962112 | E067 | 46810 |
chr10 | 81896459 | 81897501 | E068 | -17635 |
chr10 | 81898206 | 81898260 | E068 | -16876 |
chr10 | 81917862 | 81919298 | E068 | 2726 |
chr10 | 81919301 | 81919546 | E068 | 4165 |
chr10 | 81919567 | 81919645 | E068 | 4431 |
chr10 | 81927188 | 81927238 | E068 | 12052 |
chr10 | 81927303 | 81927502 | E068 | 12167 |
chr10 | 81927549 | 81927666 | E068 | 12413 |
chr10 | 81927702 | 81928127 | E068 | 12566 |
chr10 | 81928143 | 81928271 | E068 | 13007 |
chr10 | 81932771 | 81933025 | E068 | 17635 |
chr10 | 81933041 | 81933121 | E068 | 17905 |
chr10 | 81933274 | 81933651 | E068 | 18138 |
chr10 | 81936215 | 81936307 | E068 | 21079 |
chr10 | 81936446 | 81936589 | E068 | 21310 |
chr10 | 81936785 | 81936897 | E068 | 21649 |
chr10 | 81937197 | 81937402 | E068 | 22061 |
chr10 | 81937443 | 81938267 | E068 | 22307 |
chr10 | 81938312 | 81938612 | E068 | 23176 |
chr10 | 81939029 | 81939123 | E068 | 23893 |
chr10 | 81946964 | 81948227 | E068 | 31828 |
chr10 | 81948376 | 81948840 | E068 | 33240 |
chr10 | 81955658 | 81957121 | E068 | 40522 |
chr10 | 81957136 | 81957343 | E068 | 42000 |
chr10 | 81957371 | 81957411 | E068 | 42235 |
chr10 | 81957521 | 81957603 | E068 | 42385 |
chr10 | 81957710 | 81958067 | E068 | 42574 |
chr10 | 81961159 | 81961918 | E068 | 46023 |
chr10 | 81961946 | 81962112 | E068 | 46810 |
chr10 | 81962202 | 81962262 | E068 | 47066 |
chr10 | 81962414 | 81962542 | E068 | 47278 |
chr10 | 81962693 | 81962766 | E068 | 47557 |
chr10 | 81886616 | 81886989 | E069 | -28147 |
chr10 | 81897729 | 81898057 | E069 | -17079 |
chr10 | 81898206 | 81898260 | E069 | -16876 |
chr10 | 81898334 | 81898499 | E069 | -16637 |
chr10 | 81898508 | 81898561 | E069 | -16575 |
chr10 | 81917685 | 81917835 | E069 | 2549 |
chr10 | 81917862 | 81919298 | E069 | 2726 |
chr10 | 81936215 | 81936307 | E069 | 21079 |
chr10 | 81936446 | 81936589 | E069 | 21310 |
chr10 | 81955658 | 81957121 | E069 | 40522 |
chr10 | 81957710 | 81958067 | E069 | 42574 |
chr10 | 81958101 | 81958624 | E069 | 42965 |
chr10 | 81960962 | 81961090 | E069 | 45826 |
chr10 | 81886616 | 81886989 | E071 | -28147 |
chr10 | 81896459 | 81897501 | E071 | -17635 |
chr10 | 81897729 | 81898057 | E071 | -17079 |
chr10 | 81903577 | 81905120 | E071 | -10016 |
chr10 | 81905368 | 81906090 | E071 | -9046 |
chr10 | 81906160 | 81906204 | E071 | -8932 |
chr10 | 81906264 | 81906397 | E071 | -8739 |
chr10 | 81917685 | 81917835 | E071 | 2549 |
chr10 | 81917862 | 81919298 | E071 | 2726 |
chr10 | 81919301 | 81919546 | E071 | 4165 |
chr10 | 81919567 | 81919645 | E071 | 4431 |
chr10 | 81919695 | 81919754 | E071 | 4559 |
chr10 | 81919898 | 81919948 | E071 | 4762 |
chr10 | 81932771 | 81933025 | E071 | 17635 |
chr10 | 81933041 | 81933121 | E071 | 17905 |
chr10 | 81937443 | 81938267 | E071 | 22307 |
chr10 | 81938312 | 81938612 | E071 | 23176 |
chr10 | 81938723 | 81938777 | E071 | 23587 |
chr10 | 81938978 | 81939018 | E071 | 23842 |
chr10 | 81939029 | 81939123 | E071 | 23893 |
chr10 | 81946301 | 81946901 | E071 | 31165 |
chr10 | 81946964 | 81948227 | E071 | 31828 |
chr10 | 81948986 | 81949098 | E071 | 33850 |
chr10 | 81955658 | 81957121 | E071 | 40522 |
chr10 | 81957710 | 81958067 | E071 | 42574 |
chr10 | 81958101 | 81958624 | E071 | 42965 |
chr10 | 81958676 | 81958806 | E071 | 43540 |
chr10 | 81961946 | 81962112 | E071 | 46810 |
chr10 | 81896459 | 81897501 | E072 | -17635 |
chr10 | 81897729 | 81898057 | E072 | -17079 |
chr10 | 81898206 | 81898260 | E072 | -16876 |
chr10 | 81905368 | 81906090 | E072 | -9046 |
chr10 | 81906160 | 81906204 | E072 | -8932 |
chr10 | 81917862 | 81919298 | E072 | 2726 |
chr10 | 81923395 | 81924117 | E072 | 8259 |
chr10 | 81927303 | 81927502 | E072 | 12167 |
chr10 | 81927549 | 81927666 | E072 | 12413 |
chr10 | 81927702 | 81928127 | E072 | 12566 |
chr10 | 81928143 | 81928271 | E072 | 13007 |
chr10 | 81936215 | 81936307 | E072 | 21079 |
chr10 | 81936446 | 81936589 | E072 | 21310 |
chr10 | 81937443 | 81938267 | E072 | 22307 |
chr10 | 81946964 | 81948227 | E072 | 31828 |
chr10 | 81954120 | 81954418 | E072 | 38984 |
chr10 | 81954436 | 81954505 | E072 | 39300 |
chr10 | 81954598 | 81954792 | E072 | 39462 |
chr10 | 81954858 | 81954984 | E072 | 39722 |
chr10 | 81955026 | 81955279 | E072 | 39890 |
chr10 | 81955287 | 81955365 | E072 | 40151 |
chr10 | 81955549 | 81955606 | E072 | 40413 |
chr10 | 81955658 | 81957121 | E072 | 40522 |
chr10 | 81957136 | 81957343 | E072 | 42000 |
chr10 | 81957710 | 81958067 | E072 | 42574 |
chr10 | 81958101 | 81958624 | E072 | 42965 |
chr10 | 81896459 | 81897501 | E073 | -17635 |
chr10 | 81897729 | 81898057 | E073 | -17079 |
chr10 | 81916010 | 81916266 | E073 | 874 |
chr10 | 81917685 | 81917835 | E073 | 2549 |
chr10 | 81917862 | 81919298 | E073 | 2726 |
chr10 | 81926486 | 81926598 | E073 | 11350 |
chr10 | 81927040 | 81927126 | E073 | 11904 |
chr10 | 81927188 | 81927238 | E073 | 12052 |
chr10 | 81927303 | 81927502 | E073 | 12167 |
chr10 | 81927549 | 81927666 | E073 | 12413 |
chr10 | 81927702 | 81928127 | E073 | 12566 |
chr10 | 81928143 | 81928271 | E073 | 13007 |
chr10 | 81932771 | 81933025 | E073 | 17635 |
chr10 | 81933041 | 81933121 | E073 | 17905 |
chr10 | 81933274 | 81933651 | E073 | 18138 |
chr10 | 81937443 | 81938267 | E073 | 22307 |
chr10 | 81940233 | 81940382 | E073 | 25097 |
chr10 | 81957710 | 81958067 | E073 | 42574 |
chr10 | 81958101 | 81958624 | E073 | 42965 |
chr10 | 81960962 | 81961090 | E073 | 45826 |
chr10 | 81961159 | 81961918 | E073 | 46023 |
chr10 | 81961946 | 81962112 | E073 | 46810 |
chr10 | 81962202 | 81962262 | E073 | 47066 |
chr10 | 81896459 | 81897501 | E074 | -17635 |
chr10 | 81897729 | 81898057 | E074 | -17079 |
chr10 | 81927040 | 81927126 | E074 | 11904 |
chr10 | 81927188 | 81927238 | E074 | 12052 |
chr10 | 81927303 | 81927502 | E074 | 12167 |
chr10 | 81927549 | 81927666 | E074 | 12413 |
chr10 | 81932771 | 81933025 | E074 | 17635 |
chr10 | 81933041 | 81933121 | E074 | 17905 |
chr10 | 81937443 | 81938267 | E074 | 22307 |
chr10 | 81946964 | 81948227 | E074 | 31828 |
Chromosome | Start | End | Region | Distance(-/+:Up/Downstream) |
---|---|---|---|---|
chr10 | 81892029 | 81893557 | E067 | -21579 |
chr10 | 81892029 | 81893557 | E068 | -21579 |
chr10 | 81892029 | 81893557 | E072 | -21579 |
chr10 | 81892029 | 81893557 | E073 | -21579 |
chr10 | 81892029 | 81893557 | E082 | -21579 |