SNP Detail Info-rs2881345

Organism: Homo sapiens

Alleles: C>A / C>T

Gene : Feature

None

p-value: Check p-value

Variation Type: SNV (Single Nucleotide Variation)

Frequency:

A=0300 (8980/29886,GnomAD)
A=0399 (11638/29118,TOPMED)
A=0311 (1556/5008,1000G)
A=0135 (521/3854,ALSPAC)
A=0150 (557/3708,TWINSUK)

Position: chr14:57201005 (GRCh38.p7) (14q22.3)

Phenotype: AD

Dataset:

GWASdb2

Publications: 1 publication(s)

Genomic View: See rs on genome

Enhancer: 0 Enhancer around

Promoter: 0 Promoter around

Study	Population	Group	Sample #	Ref Allele	Alt Allele
1000Genomes	African	Sub	1322	C=0.154	A=0.846
1000Genomes	American	Sub	694	C=0.870	A=0.130
1000Genomes	East Asian	Sub	1008	C=0.886	A=0.114
1000Genomes	Europe	Sub	1006	C=0.882	A=0.118
1000Genomes	Global	Study-wide	5008	C=0.689	A=0.311
1000Genomes	South Asian	Sub	978	C=0.880	A=0.120
The Avon Longitudinal Study of Parents and Children	PARENT AND CHILD COHORT	Study-wide	3854	C=0.865	A=0.135
The Genome Aggregation Database	African	Sub	8702	C=0.279	T=0.000
The Genome Aggregation Database	American	Sub	836	C=0.890	T=0.00,
The Genome Aggregation Database	East Asian	Sub	1612	C=0.855	T=0.000
The Genome Aggregation Database	Europe	Sub	18434	C=0.873	T=0.000
The Genome Aggregation Database	Global	Study-wide	29886	C=0.699	T=0.000
The Genome Aggregation Database	Other	Sub	302	C=0.850	T=0.00,
Trans-Omics for Precision Medicine	Global	Study-wide	29118	C=0.600	A=0.399
UK 10K study - Twins	TWIN COHORT	Study-wide	3708	C=0.850	A=0.150

PMID	Title	Author	Journal
23743675	A meta-analysis of two genome-wide association studies to identify novel loci for maximum number of alcoholic drinks.	Kapoor M	Hum Genet

SNP ID	p-value	Traits	Study
rs2881345	7.7E-05	alcohol consumption	23743675

Position (v37)	eGene	GeneID	Variant	p-value	TSS	Tissue
There is no eQTL annotation for this SNP

Probe ID	Position	Gene	beta	p-value
There is no meQTL annotation for this SNP

rs2881345