rs292476

Homo sapiens
A>G
None
Check p-value
SNV (Single Nucleotide Variation)
G=0268 (8026/29916,GnomAD)
G=0293 (8550/29116,TOPMED)
G=0358 (1794/5008,1000G)
G=0196 (757/3854,ALSPAC)
G=0184 (684/3708,TWINSUK)
chr13:22458981 (GRCh38.p7) (13q12.11)
AD
GWASdb2
1   publication(s)
See rs on genome
13 Enhancers around
0 Promoter around

Genomic Coordinates

Sequence Name Change(s)
GRCh38.p7 chr 13NC_000013.11:g.22458981A>G
GRCh37.p13 chr 13NC_000013.10:g.23033120A>G

Population Frequency

Study Population Group Sample # Ref Allele Alt Allele
1000GenomesAfricanSub1322A=0.545G=0.455
1000GenomesAmericanSub694A=0.630G=0.370
1000GenomesEast AsianSub1008A=0.571G=0.429
1000GenomesEuropeSub1006A=0.804G=0.196
1000GenomesGlobalStudy-wide5008A=0.642G=0.358
1000GenomesSouth AsianSub978A=0.690G=0.310
The Avon Longitudinal Study of Parents and ChildrenPARENT AND CHILD COHORTStudy-wide3854A=0.804G=0.196
The Genome Aggregation DatabaseAfricanSub8688A=0.587G=0.413
The Genome Aggregation DatabaseAmericanSub836A=0.590G=0.410
The Genome Aggregation DatabaseEast AsianSub1608A=0.594G=0.406
The Genome Aggregation DatabaseEuropeSub18482A=0.817G=0.182
The Genome Aggregation DatabaseGlobalStudy-wide29916A=0.731G=0.268
The Genome Aggregation DatabaseOtherSub302A=0.800G=0.200
Trans-Omics for Precision MedicineGlobalStudy-wide29116A=0.706G=0.293
UK 10K study - TwinsTWIN COHORTStudy-wide3708A=0.816G=0.184
PMID Title Author Journal
23953852Genome-wide association studies of maximum number of drinks.Pan YJ Psychiatr Res

P-Value

SNP ID p-value Traits Study
rs2924762.11E-05alcohol consumption23953852

eQTL of rs292476 in Brain tissues (GTEx Analysis Release V7)

Position (v37) eGene GeneID Variant p-value TSS Tissue
There is no eQTL annotation for this SNP

meQTL of rs292476 in Fetal Brain

Probe ID Position Gene beta p-value
There is no meQTL annotation for this SNP

Genomic View

Chromatin Interaction

There is no significant Hi-C chromatin interaction data for this SNP.

Enhancer Annotation (GRCh37.p13)

Chromosome Start End Region Distance ( -/+ : Up/Downstream )
chr132302538523025934E067-7186
chr132302597323026074E067-7046
chr132302538523025934E068-7186
chr132302597323026074E068-7046
chr132302538523025934E070-7186
chr132302597323026074E070-7046
chr132302538523025934E071-7186
chr132302597323026074E071-7046
chr132307136223071488E07138242
chr132302538523025934E074-7186
chr132302597323026074E074-7046
chr132302538523025934E082-7186
chr132302597323026074E082-7046