rs2967391

Homo sapiens
T>G
None
Check p-value
SNV (Single Nucleotide Variation)
G=0349 (10451/29870,GnomAD)
G=0434 (12642/29118,TOPMED)
G=0497 (2487/5008,1000G)
G=0147 (567/3854,ALSPAC)
G=0129 (480/3708,TWINSUK)
chr16:82196787 (GRCh38.p7) (16q23.3)
AD
GWASdb2
1   publication(s)
See rs on genome
20 Enhancers around
10 Promoters around

Genomic Coordinates

Sequence Name Change(s)
GRCh38.p7 chr 16NC_000016.10:g.82196787T>G
GRCh37.p13 chr 16NC_000016.9:g.82230392T>G

Population Frequency

Study Population Group Sample # Ref Allele Alt Allele
1000GenomesAfricanSub1322T=0.185G=0.815
1000GenomesAmericanSub694T=0.510G=0.490
1000GenomesEast AsianSub1008T=0.573G=0.427
1000GenomesEuropeSub1006T=0.840G=0.160
1000GenomesGlobalStudy-wide5008T=0.503G=0.497
1000GenomesSouth AsianSub978T=0.510G=0.490
The Avon Longitudinal Study of Parents and ChildrenPARENT AND CHILD COHORTStudy-wide3854T=0.853G=0.147
The Genome Aggregation DatabaseAfricanSub8700T=0.269G=0.731
The Genome Aggregation DatabaseAmericanSub834T=0.470G=0.530
The Genome Aggregation DatabaseEast AsianSub1616T=0.627G=0.373
The Genome Aggregation DatabaseEuropeSub18418T=0.838G=0.161
The Genome Aggregation DatabaseGlobalStudy-wide29870T=0.650G=0.349
The Genome Aggregation DatabaseOtherSub302T=0.780G=0.220
Trans-Omics for Precision MedicineGlobalStudy-wide29118T=0.565G=0.434
UK 10K study - TwinsTWIN COHORTStudy-wide3708T=0.871G=0.129
PMID Title Author Journal
23743675A meta-analysis of two genome-wide association studies to identify novel loci for maximum number of alcoholic drinks.Kapoor MHum Genet

P-Value

SNP ID p-value Traits Study
rs29673911.72E-05alcohol consumption23743675

eQTL of rs2967391 in Brain tissues (GTEx Analysis Release V7)

Position (v37) eGene GeneID Variant p-value TSS Tissue
There is no eQTL annotation for this SNP

meQTL of rs2967391 in Fetal Brain

Probe ID Position Gene beta p-value
There is no meQTL annotation for this SNP

Genomic View

Chromatin Interaction

There is no significant Hi-C chromatin interaction data for this SNP.

Enhancer Annotation (GRCh37.p13)

Chromosome Start End Region Distance ( -/+ : Up/Downstream )
chr168218109982181159E067-49233
chr168220238182202446E067-27946
chr168222352982224363E068-6029
chr168218109982181159E069-49233
chr168220238182202446E070-27946
chr168218109982181159E071-49233
chr168220238182202446E071-27946
chr168220467882204761E071-25631
chr168222352982224363E071-6029
chr168218109982181159E072-49233
chr168219396582194250E072-36142
chr168220238182202446E072-27946
chr168218109982181159E074-49233
chr168220238182202446E074-27946
chr168222281782223046E074-7346
chr168222352982224363E074-6029
chr168219499982195387E081-35005
chr168219568282195722E081-34670
chr168220238182202446E081-27946
chr168220467882204761E081-25631








Promoter Annotation (GRCh37.p13)

Chromosome Start End Region Distance(-/+:Up/Downstream)
chr168220320982204552E067-25840
chr168220320982204552E068-25840
chr168220320982204552E069-25840
chr168220320982204552E070-25840
chr168220320982204552E071-25840
chr168220320982204552E072-25840
chr168220320982204552E073-25840
chr168220320982204552E074-25840
chr168220320982204552E081-25840
chr168220320982204552E082-25840