rs2967395

Homo sapiens
G>C
None
Check p-value
SNV (Single Nucleotide Variation)
C=0325 (9759/29948,GnomAD)
C=0401 (11679/29118,TOPMED)
C=0464 (2326/5008,1000G)
C=0147 (567/3854,ALSPAC)
C=0129 (478/3708,TWINSUK)
chr16:82199458 (GRCh38.p7) (16q23.3)
AD
GWASdb2
1   publication(s)
See rs on genome
20 Enhancers around
10 Promoters around

Genomic Coordinates

Sequence Name Change(s)
GRCh38.p7 chr 16NC_000016.10:g.82199458G>C
GRCh37.p13 chr 16NC_000016.9:g.82233063G>C

Population Frequency

Study Population Group Sample # Ref Allele Alt Allele
1000GenomesAfricanSub1322G=0.272C=0.728
1000GenomesAmericanSub694G=0.540C=0.460
1000GenomesEast AsianSub1008G=0.588C=0.412
1000GenomesEuropeSub1006G=0.843C=0.157
1000GenomesGlobalStudy-wide5008G=0.536C=0.464
1000GenomesSouth AsianSub978G=0.520C=0.480
The Avon Longitudinal Study of Parents and ChildrenPARENT AND CHILD COHORTStudy-wide3854G=0.853C=0.147
The Genome Aggregation DatabaseAfricanSub8714G=0.345C=0.655
The Genome Aggregation DatabaseAmericanSub836G=0.490C=0.510
The Genome Aggregation DatabaseEast AsianSub1614G=0.631C=0.369
The Genome Aggregation DatabaseEuropeSub18482G=0.839C=0.160
The Genome Aggregation DatabaseGlobalStudy-wide29948G=0.674C=0.325
The Genome Aggregation DatabaseOtherSub302G=0.780C=0.220
Trans-Omics for Precision MedicineGlobalStudy-wide29118G=0.598C=0.401
UK 10K study - TwinsTWIN COHORTStudy-wide3708G=0.871C=0.129
PMID Title Author Journal
23743675A meta-analysis of two genome-wide association studies to identify novel loci for maximum number of alcoholic drinks.Kapoor MHum Genet

P-Value

SNP ID p-value Traits Study
rs29673951.93E-05alcohol consumption23743675

eQTL of rs2967395 in Brain tissues (GTEx Analysis Release V7)

Position (v37) eGene GeneID Variant p-value TSS Tissue
There is no eQTL annotation for this SNP

meQTL of rs2967395 in Fetal Brain

Probe ID Position Gene beta p-value
There is no meQTL annotation for this SNP

Genomic View

Chromatin Interaction

There is no significant Hi-C chromatin interaction data for this SNP.

Enhancer Annotation (GRCh37.p13)

Chromosome Start End Region Distance ( -/+ : Up/Downstream )
chr168220238182202446E067-30617
chr168222352982224363E068-8700
chr168228172782281834E06848664
chr168228194582282010E06848882
chr168228202682282077E06848963
chr168228228182282335E06849218
chr168228239182282510E06849328
chr168220238182202446E070-30617
chr168220238182202446E071-30617
chr168220467882204761E071-28302
chr168222352982224363E071-8700
chr168219396582194250E072-38813
chr168220238182202446E072-30617
chr168220238182202446E074-30617
chr168222281782223046E074-10017
chr168222352982224363E074-8700
chr168219499982195387E081-37676
chr168219568282195722E081-37341
chr168220238182202446E081-30617
chr168220467882204761E081-28302







Promoter Annotation (GRCh37.p13)

Chromosome Start End Region Distance(-/+:Up/Downstream)
chr168220320982204552E067-28511
chr168220320982204552E068-28511
chr168220320982204552E069-28511
chr168220320982204552E070-28511
chr168220320982204552E071-28511
chr168220320982204552E072-28511
chr168220320982204552E073-28511
chr168220320982204552E074-28511
chr168220320982204552E081-28511
chr168220320982204552E082-28511