SNP Detail Info-rs3092155

Organism: Homo sapiens

Alleles: A>G

Gene : Feature

None

p-value: Check p-value

Variation Type: SNV (Single Nucleotide Variation)

Frequency:

G=0217 (6517/29958,GnomAD)
G=0140 (701/5008,1000G)
G=0264 (1018/3854,ALSPAC)
G=0257 (954/3708,TWINSUK)

Position: chr20:40413231 (GRCh38.p7) (20q12)

Phenotype: ND

Dataset:

GWASdb2

Publications: 1 publication(s)

Genomic View: See rs on genome

Enhancer: 0 Enhancer around

Promoter: 0 Promoter around

Sequence Name	Change(s)
GRCh38.p7 chr 20	NC_000020.11:g.40413231A>G
GRCh37.p13 chr 20	NC_000020.10:g.39041871A>G

Study	Population	Group	Sample #	Ref Allele	Alt Allele
1000Genomes	African	Sub	1322	A=0.947	G=0.053
1000Genomes	American	Sub	694	A=0.810	G=0.190
1000Genomes	East Asian	Sub	1008	A=0.891	G=0.109
1000Genomes	Europe	Sub	1006	A=0.718	G=0.282
1000Genomes	Global	Study-wide	5008	A=0.860	G=0.140
1000Genomes	South Asian	Sub	978	A=0.890	G=0.110
The Avon Longitudinal Study of Parents and Children	PARENT AND CHILD COHORT	Study-wide	3854	A=0.736	G=0.264
The Genome Aggregation Database	African	Sub	8722	A=0.921	G=0.079
The Genome Aggregation Database	American	Sub	838	A=0.790	G=0.210
The Genome Aggregation Database	East Asian	Sub	1622	A=0.883	G=0.117
The Genome Aggregation Database	Europe	Sub	18474	A=0.706	G=0.293
The Genome Aggregation Database	Global	Study-wide	29958	A=0.782	G=0.217
The Genome Aggregation Database	Other	Sub	302	A=0.850	G=0.150
UK 10K study - Twins	TWIN COHORT	Study-wide	3708	A=0.743	G=0.257

PMID	Title	Author	Journal
20158304	A genomewide association study of nicotine and alcohol dependence in Australian and Dutch populations.	Lind PA	Twin Res Hum Genet

SNP ID	p-value	Traits	Study
rs3092155	4.37E-06	alcohol and nictotine co-dependence	20158304

Position (v37)	eGene	GeneID	Variant	p-value	TSS	Tissue
There is no eQTL annotation for this SNP

Probe ID	Position	Gene	beta	p-value
There is no meQTL annotation for this SNP

rs3092155