rs35950138

Homo sapiens
C>T
None
Check p-value
SNV (Single Nucleotide Variation)
T=0114 (3416/29910,GnomAD)
T=0096 (2812/29118,TOPMED)
T=0118 (591/5008,1000G)
T=0106 (410/3854,ALSPAC)
T=0114 (422/3708,TWINSUK)
chr9:14483145 (GRCh38.p7) (9p22.3)
AD
GWASdb2
1   publication(s)
See rs on genome
88 Enhancers around
0 Promoter around

Genomic Coordinates

Sequence Name Change(s)
GRCh38.p7 chr 9NC_000009.12:g.14483145C>T
GRCh37.p13 chr 9NC_000009.11:g.14483143C>T

Population Frequency

Study Population Group Sample # Ref Allele Alt Allele
1000GenomesAfricanSub1322C=0.911T=0.089
1000GenomesAmericanSub694C=0.940T=0.060
1000GenomesEast AsianSub1008C=0.871T=0.129
1000GenomesEuropeSub1006C=0.879T=0.121
1000GenomesGlobalStudy-wide5008C=0.882T=0.118
1000GenomesSouth AsianSub978C=0.820T=0.180
The Avon Longitudinal Study of Parents and ChildrenPARENT AND CHILD COHORTStudy-wide3854C=0.894T=0.106
The Genome Aggregation DatabaseAfricanSub8714C=0.899T=0.101
The Genome Aggregation DatabaseAmericanSub836C=0.940T=0.060
The Genome Aggregation DatabaseEast AsianSub1610C=0.861T=0.139
The Genome Aggregation DatabaseEuropeSub18448C=0.880T=0.119
The Genome Aggregation DatabaseGlobalStudy-wide29910C=0.885T=0.114
The Genome Aggregation DatabaseOtherSub302C=0.820T=0.180
Trans-Omics for Precision MedicineGlobalStudy-wide29118C=0.903T=0.096
UK 10K study - TwinsTWIN COHORTStudy-wide3708C=0.886T=0.114
PMID Title Author Journal
23743675A meta-analysis of two genome-wide association studies to identify novel loci for maximum number of alcoholic drinks.Kapoor MHum Genet

P-Value

SNP ID p-value Traits Study
rs359501383.59E-05alcohol consumption23743675

eQTL of rs35950138 in Brain tissues (GTEx Analysis Release V7)

Position (v37) eGene GeneID Variant p-value TSS Tissue
There is no eQTL annotation for this SNP

meQTL of rs35950138 in Fetal Brain

Probe ID Position Gene beta p-value
There is no meQTL annotation for this SNP

Genomic View

Chromatin Interaction

There is no significant Hi-C chromatin interaction data for this SNP.

Enhancer Annotation (GRCh37.p13)

Chromosome Start End Region Distance ( -/+ : Up/Downstream )
chr91443702914438420E068-44723
chr91448279514483182E0680
chr91451551414516258E06832371
chr91443702914438420E069-44723
chr91450071314501136E06917570
chr91443702914438420E070-44723
chr91443843214438587E070-44556
chr91443867514438965E070-44178
chr91443930014439364E070-43779
chr91444120214441416E070-41727
chr91446540014466861E070-16282
chr91448279514483182E0700
chr91451531514515414E07032172
chr91451542214515477E07032279
chr91451551414516258E07032371
chr91451637014516464E07033227
chr91451651914516580E07033376
chr91451669314517143E07033550
chr91451719114517508E07034048
chr91451788514518015E07034742
chr91452095414521061E07037811
chr91452911914529268E07045976
chr91452933214529414E07046189
chr91452981814530069E07046675
chr91453008414530134E07046941
chr91453018314530237E07047040
chr91453024114530328E07047098
chr91453215714532347E07049014
chr91453236114533049E07049218
chr91443633814436638E071-46505
chr91443665914436771E071-46372
chr91443681614436860E071-46283
chr91443702914438420E071-44723
chr91443702914438420E073-44723
chr91447889714479053E074-4090
chr91447934314479421E074-3722
chr91453041614530816E07447273
chr91443702914438420E081-44723
chr91443843214438587E081-44556
chr91443867514438965E081-44178
chr91444120214441416E081-41727
chr91445060714450669E081-32474
chr91445086414451049E081-32094
chr91445109114451143E081-32000
chr91445256014452893E081-30250
chr91445300114453068E081-30075
chr91445324014453586E081-29557
chr91451551414516258E08132371
chr91451637014516464E08133227
chr91451651914516580E08133376
chr91451669314517143E08133550
chr91451719114517508E08134048
chr91453041614530816E08147273
chr91453098014531089E08147837
chr91453112014531726E08147977
chr91453176114531897E08148618
chr91453194314532111E08148800
chr91453215714532347E08149014
chr91453236114533049E08149218
chr91443447514434610E082-48533
chr91443466014434801E082-48342
chr91443702914438420E082-44723
chr91443843214438587E082-44556
chr91443867514438965E082-44178
chr91443930014439364E082-43779
chr91444009214440405E082-42738
chr91444044314440497E082-42646
chr91444057014440652E082-42491
chr91444068914440739E082-42404
chr91444077614440826E082-42317
chr91444106714441121E082-42022
chr91444120214441416E082-41727
chr91445324014453586E082-29557
chr91451551414516258E08232371
chr91451637014516464E08233227
chr91451651914516580E08233376
chr91451669314517143E08233550
chr91451719114517508E08234048
chr91451788514518015E08234742
chr91452933214529414E08246189
chr91452981814530069E08246675
chr91453008414530134E08246941
chr91453018314530237E08247040
chr91453024114530328E08247098
chr91453176114531897E08248618
chr91453194314532111E08248800
chr91453215714532347E08249014
chr91453236114533049E08249218