rs3843551

Homo sapiens
A>G
None
Check p-value
SNV (Single Nucleotide Variation)
G=0127 (3804/29858,GnomAD)
G=0140 (4095/29118,TOPMED)
G=0174 (872/5008,1000G)
G=0060 (231/3854,ALSPAC)
G=0048 (179/3708,TWINSUK)
chr8:100800817 (GRCh38.p7) (8q22.3)
AD
GWASdb2
1   publication(s)
See rs on genome
20 Enhancers around
0 Promoter around

Genomic Coordinates

Sequence Name Change(s)
GRCh38.p7 chr 8NC_000008.11:g.100800817A>G
GRCh37.p13 chr 8NC_000008.10:g.101813045A>G

Population Frequency

Study Population Group Sample # Ref Allele Alt Allele
1000GenomesAfricanSub1322A=0.756G=0.244
1000GenomesAmericanSub694A=0.800G=0.200
1000GenomesEast AsianSub1008A=0.712G=0.288
1000GenomesEuropeSub1006A=0.948G=0.052
1000GenomesGlobalStudy-wide5008A=0.826G=0.174
1000GenomesSouth AsianSub978A=0.930G=0.070
The Avon Longitudinal Study of Parents and ChildrenPARENT AND CHILD COHORTStudy-wide3854A=0.940G=0.060
The Genome Aggregation DatabaseAfricanSub8664A=0.762G=0.238
The Genome Aggregation DatabaseAmericanSub838A=0.800G=0.200
The Genome Aggregation DatabaseEast AsianSub1590A=0.684G=0.316
The Genome Aggregation DatabaseEuropeSub18464A=0.942G=0.057
The Genome Aggregation DatabaseGlobalStudy-wide29858A=0.872G=0.127
The Genome Aggregation DatabaseOtherSub302A=0.950G=0.050
Trans-Omics for Precision MedicineGlobalStudy-wide29118A=0.859G=0.140
UK 10K study - TwinsTWIN COHORTStudy-wide3708A=0.952G=0.048
PMID Title Author Journal
23743675A meta-analysis of two genome-wide association studies to identify novel loci for maximum number of alcoholic drinks.Kapoor MHum Genet

P-Value

SNP ID p-value Traits Study
rs38435514.39E-05alcohol consumption23743675

eQTL of rs3843551 in Brain tissues (GTEx Analysis Release V7)

Position (v37) eGene GeneID Variant p-value TSS Tissue
There is no eQTL annotation for this SNP

meQTL of rs3843551 in Fetal Brain

Probe ID Position Gene beta p-value
There is no meQTL annotation for this SNP

Genomic View

Chromatin Interaction

There is no significant Hi-C chromatin interaction data for this SNP.

Enhancer Annotation (GRCh37.p13)

Chromosome Start End Region Distance ( -/+ : Up/Downstream )
chr8101773554101775046E068-37999
chr8101847470101848214E06834425
chr8101764400101764498E071-48547
chr8101764560101764751E071-48294
chr8101764770101764823E071-48222
chr8101803597101803661E072-9384
chr8101803758101804338E074-8707
chr8101804391101804510E074-8535
chr8101847470101848214E07434425
chr8101848259101848339E07435214
chr8101859230101859295E07446185
chr8101775773101775823E081-37222
chr8101775832101775882E081-37163
chr8101775951101776079E081-36966
chr8101803597101803661E081-9384
chr8101803758101804338E081-8707
chr8101804391101804510E081-8535
chr8101851627101851825E08138582
chr8101851845101851917E08138800
chr8101775334101775644E082-37401