rs3911770

Homo sapiens
T>G
None
Check p-value
SNV (Single Nucleotide Variation)
G=0412 (12226/29674,GnomAD)
G=0385 (11219/29118,TOPMED)
G=0469 (2348/5008,1000G)
G=0412 (1588/3854,ALSPAC)
G=0416 (1543/3708,TWINSUK)
chr8:75899473 (GRCh38.p7) (8q21.13)
AD
GWASdb2
1   publication(s)
See rs on genome
0 Enhancer around
0 Promoter around

Genomic Coordinates

Sequence Name Change(s)
GRCh38.p7 chr 8NC_000008.11:g.75899473T>G
GRCh37.p13 chr 8NC_000008.10:g.76811708T>G

Population Frequency

Study Population Group Sample # Ref Allele Alt Allele
1000GenomesAfricanSub1322T=0.684G=0.316
1000GenomesAmericanSub694T=0.440G=0.560
1000GenomesEast AsianSub1008T=0.310G=0.690
1000GenomesEuropeSub1006T=0.571G=0.429
1000GenomesGlobalStudy-wide5008T=0.531G=0.469
1000GenomesSouth AsianSub978T=0.580G=0.420
The Avon Longitudinal Study of Parents and ChildrenPARENT AND CHILD COHORTStudy-wide3854T=0.588G=0.412
The Genome Aggregation DatabaseAfricanSub8680T=0.665G=0.335
The Genome Aggregation DatabaseAmericanSub830T=0.440G=0.560
The Genome Aggregation DatabaseEast AsianSub1512T=0.330G=0.670
The Genome Aggregation DatabaseEuropeSub18352T=0.579G=0.420
The Genome Aggregation DatabaseGlobalStudy-wide29674T=0.588G=0.412
The Genome Aggregation DatabaseOtherSub300T=0.580G=0.420
Trans-Omics for Precision MedicineGlobalStudy-wide29118T=0.614G=0.385
UK 10K study - TwinsTWIN COHORTStudy-wide3708T=0.584G=0.416
PMID Title Author Journal
21529783A quantitative-trait genome-wide association study of alcoholism risk in the community: findings and implications.Heath ACBiol Psychiatry

P-Value

SNP ID p-value Traits Study
rs39117706.6E-05alcoholism (heaviness of drinking)21529783

eQTL of rs3911770 in Brain tissues (GTEx Analysis Release V7)

Position (v37) eGene GeneID Variant p-value TSS Tissue
There is no eQTL annotation for this SNP

meQTL of rs3911770 in Fetal Brain

Probe ID Position Gene beta p-value
There is no meQTL annotation for this SNP

Genomic View

Chromatin Interaction

There is no significant Hi-C chromatin interaction data for this SNP.