rs4437240

Homo sapiens
C>A / C>G / C>T
None
Check p-value
SNV (Single Nucleotide Variation)
G=0266 (7972/29932,GnomAD)
G=0256 (1283/5008,1000G)
chr4:81510915 (GRCh38.p7) (4q21.22)
AD
GWASdb2
1   publication(s)
See rs on genome
0 Enhancer around
0 Promoter around

Genomic Coordinates

Sequence Name Change(s)
GRCh38.p7 chr 4NC_000004.12:g.81510915C>A
GRCh38.p7 chr 4NC_000004.12:g.81510915C>G
GRCh38.p7 chr 4NC_000004.12:g.81510915C>T
GRCh37.p13 chr 4NC_000004.11:g.82432069C>A
GRCh37.p13 chr 4NC_000004.11:g.82432069C>G
GRCh37.p13 chr 4NC_000004.11:g.82432069C>T

Population Frequency

Study Population Group Sample # Ref Allele Alt Allele
1000GenomesAfricanSub1322C=0.603A=0.001
1000GenomesAmericanSub694C=0.810A=0.00,
1000GenomesEast AsianSub1008C=0.803A=0.002
1000GenomesEuropeSub1006C=0.744A=0.007
1000GenomesGlobalStudy-wide5008C=0.739A=0.004
1000GenomesSouth AsianSub978C=0.800A=0.01,
The Genome Aggregation DatabaseAfricanSub8694C=0.621G=0.375
The Genome Aggregation DatabaseAmericanSub836C=0.770G=0.23,
The Genome Aggregation DatabaseEast AsianSub1616C=0.805G=0.195
The Genome Aggregation DatabaseEuropeSub18484C=0.766G=0.225
The Genome Aggregation DatabaseGlobalStudy-wide29932C=0.727G=0.266
The Genome Aggregation DatabaseOtherSub302C=0.830G=0.17,
PMID Title Author Journal
21314694Genomewide association analysis of symptoms of alcohol dependence in the molecular genetics of schizophrenia (MGS2) control sample.Kendler KSAlcohol Clin Exp Res

P-Value

SNP ID p-value Traits Study
rs44372400.000814alcohol dependence21314694

eQTL of rs4437240 in Brain tissues (GTEx Analysis Release V7)

Position (v37) eGene GeneID Variant p-value TSS Tissue
There is no eQTL annotation for this SNP

meQTL of rs4437240 in Fetal Brain

Probe ID Position Gene beta p-value
There is no meQTL annotation for this SNP

Genomic View

Chromatin Interaction

There is no significant Hi-C chromatin interaction data for this SNP.