| Sequence Name | Change(s) |
|---|---|
| GRCh38.p7 chr 12 | NC_000012.12:g.86848345A>G |
| GRCh37.p13 chr 12 | NC_000012.11:g.87242122A>G |
| Study | Population | Group | Sample # | Ref Allele | Alt Allele |
|---|---|---|---|---|---|
| 1000Genomes | African | Sub | 1322 | A=0.995 | G=0.005 |
| 1000Genomes | American | Sub | 694 | A=0.900 | G=0.100 |
| 1000Genomes | East Asian | Sub | 1008 | A=0.998 | G=0.002 |
| 1000Genomes | Europe | Sub | 1006 | A=0.846 | G=0.154 |
| 1000Genomes | Global | Study-wide | 5008 | A=0.939 | G=0.061 |
| 1000Genomes | South Asian | Sub | 978 | A=0.920 | G=0.080 |
| The Avon Longitudinal Study of Parents and Children | PARENT AND CHILD COHORT | Study-wide | 3854 | A=0.843 | G=0.157 |
| The Genome Aggregation Database | African | Sub | 8722 | A=0.972 | G=0.028 |
| The Genome Aggregation Database | American | Sub | 836 | A=0.920 | G=0.080 |
| The Genome Aggregation Database | East Asian | Sub | 1616 | A=0.999 | G=0.001 |
| The Genome Aggregation Database | Europe | Sub | 18420 | A=0.846 | G=0.153 |
| The Genome Aggregation Database | Global | Study-wide | 29896 | A=0.893 | G=0.106 |
| The Genome Aggregation Database | Other | Sub | 302 | A=0.870 | G=0.130 |
| Trans-Omics for Precision Medicine | Global | Study-wide | 29118 | A=0.908 | G=0.091 |
| UK 10K study - Twins | TWIN COHORT | Study-wide | 3708 | A=0.851 | G=0.149 |
| PMID | Title | Author | Journal |
|---|---|---|---|
| 21314694 | Genomewide association analysis of symptoms of alcohol dependence in the molecular genetics of schizophrenia (MGS2) control sample. | Kendler KS | Alcohol Clin Exp Res |
| SNP ID | p-value | Traits | Study |
|---|---|---|---|
| rs4509845 | 0.000687 | alcohol dependence | 21314694 |
| Position (v37) | eGene | GeneID | Variant | p-value | TSS | Tissue | |
|---|---|---|---|---|---|---|---|
| There is no eQTL annotation for this SNP | |||||||
| Probe ID | Position | Gene | beta | p-value | |||
|---|---|---|---|---|---|---|---|
| There is no meQTL annotation for this SNP | |||||||
There is no significant Hi-C chromatin interaction data for this SNP.
| Chromosome | Start | End | Region | Distance(-/+:Up/Downstream) |
|---|---|---|---|---|
| chr12 | 87232282 | 87233066 | E067 | -9056 |
| chr12 | 87232282 | 87233066 | E068 | -9056 |
| chr12 | 87232282 | 87233066 | E069 | -9056 |
| chr12 | 87232282 | 87233066 | E071 | -9056 |
| chr12 | 87232282 | 87233066 | E072 | -9056 |
| chr12 | 87232282 | 87233066 | E073 | -9056 |
| chr12 | 87232282 | 87233066 | E081 | -9056 |
| chr12 | 87232282 | 87233066 | E082 | -9056 |