SNP Detail Info-rs4706834

Molecule type	Change	Amino acid[Codon]	SO Term
BCKDHB transcript variant 2	NM_000056.4:c.	N/A	Intron Variant
BCKDHB transcript variant 3	NM_001318975.1:c.	N/A	Intron Variant
BCKDHB transcript variant 1	NM_183050.3:c.	N/A	Intron Variant
BCKDHB transcript variant 4	NR_134945.1:n.	N/A	Intron Variant
BCKDHB transcript variant X2	XM_005248756.4:c.	N/A	Intron Variant
BCKDHB transcript variant X7	XM_011536024.2:c.	N/A	Intron Variant
BCKDHB transcript variant X9	XM_011536026.2:c.	N/A	Intron Variant
BCKDHB transcript variant X5	XM_011536023.2:c.	N/A	Genic Downstream Transcript Variant
BCKDHB transcript variant X8	XM_011536025.2:c.	N/A	Genic Downstream Transcript Variant
BCKDHB transcript variant X1	XR_001743546.1:n.	N/A	Intron Variant
BCKDHB transcript variant X3	XR_001743547.1:n.	N/A	Intron Variant
BCKDHB transcript variant X4	XR_001743548.1:n.	N/A	Intron Variant
BCKDHB transcript variant X6	XR_001743549.1:n.	N/A	Intron Variant

Study	Population	Group	Sample #	Ref Allele	Alt Allele
1000Genomes	African	Sub	1322	G=0.893	T=0.107
1000Genomes	American	Sub	694	G=0.380	T=0.620
1000Genomes	East Asian	Sub	1008	G=0.454	T=0.546
1000Genomes	Europe	Sub	1006	G=0.533	T=0.467
1000Genomes	Global	Study-wide	5008	G=0.599	T=0.401
1000Genomes	South Asian	Sub	978	G=0.580	T=0.420
The Avon Longitudinal Study of Parents and Children	PARENT AND CHILD COHORT	Study-wide	3854	G=0.540	T=0.460
The Genome Aggregation Database	African	Sub	8714	G=0.841	T=0.159
The Genome Aggregation Database	American	Sub	834	G=0.380	T=0.620
The Genome Aggregation Database	East Asian	Sub	1612	G=0.440	T=0.560
The Genome Aggregation Database	Europe	Sub	18424	G=0.552	T=0.447
The Genome Aggregation Database	Global	Study-wide	29886	G=0.625	T=0.374
The Genome Aggregation Database	Other	Sub	302	G=0.500	T=0.500
Trans-Omics for Precision Medicine	Global	Study-wide	29118	G=0.664	T=0.335
UK 10K study - Twins	TWIN COHORT	Study-wide	3708	G=0.552	T=0.448

PMID	Title	Author	Journal
20201924	Genome-wide association study of alcohol dependence implicates a region on chromosome 11.	Edenberg HJ	Alcohol Clin Exp Res

SNP ID	p-value	Traits	Study
rs4706834	0.00012	Alcohol dependence (early age of onset)	20201924
rs4706834	0.00015	alcohol dependence	20201924

Position (v37)	eGene	GeneID	Variant	p-value	TSS	Tissue
There is no eQTL annotation for this SNP

Probe ID	Position	Gene	beta	p-value
There is no meQTL annotation for this SNP

Chromosome	Start	End	Region	Distance ( -/+ : Up/Downstream )
chr6	80964352	80964402	E067	-48203
chr6	80964487	80964643	E067	-47962
chr6	80978330	80978551	E067	-34054
chr6	80978966	80979066	E067	-33539
chr6	80977692	80977816	E068	-34789
chr6	81026286	81026914	E068	13681
chr6	81041288	81041615	E068	28683
chr6	81041839	81042016	E068	29234
chr6	81041288	81041615	E070	28683
chr6	81041839	81042016	E070	29234
chr6	81043216	81043309	E070	30611
chr6	80964352	80964402	E071	-48203
chr6	80964487	80964643	E071	-47962
chr6	81026286	81026914	E071	13681
chr6	81039303	81039529	E071	26698
chr6	81039535	81039699	E071	26930
chr6	81045264	81045477	E071	32659
chr6	80964352	80964402	E072	-48203
chr6	80964487	80964643	E072	-47962
chr6	81026286	81026914	E072	13681
chr6	81038487	81038594	E072	25882
chr6	80964352	80964402	E074	-48203
chr6	80978330	80978551	E074	-34054
chr6	81039303	81039529	E074	26698
chr6	81039535	81039699	E074	26930
chr6	80986310	80986364	E082	-26241
chr6	80986677	80986794	E082	-25811
chr6	81041288	81041615	E082	28683
chr6	81041839	81042016	E082	29234
chr6	81043216	81043309	E082	30611
chr6	81044101	81044184	E082	31496
chr6	81044259	81044498	E082	31654

rs4706834