Sequence Name | Change(s) |
---|---|
GRCh38.p7 chr 8 | NC_000008.11:g.92556715G>T |
GRCh37.p13 chr 8 | NC_000008.10:g.93568943G>T |
Study | Population | Group | Sample # | Ref Allele | Alt Allele |
---|---|---|---|---|---|
1000Genomes | African | Sub | 1322 | G=0.464 | T=0.536 |
1000Genomes | American | Sub | 694 | G=0.320 | T=0.680 |
1000Genomes | East Asian | Sub | 1008 | G=0.012 | T=0.988 |
1000Genomes | Europe | Sub | 1006 | G=0.325 | T=0.675 |
1000Genomes | Global | Study-wide | 5008 | G=0.257 | T=0.743 |
1000Genomes | South Asian | Sub | 978 | G=0.110 | T=0.890 |
The Avon Longitudinal Study of Parents and Children | PARENT AND CHILD COHORT | Study-wide | 3854 | G=0.292 | T=0.708 |
The Genome Aggregation Database | African | Sub | 8698 | G=0.456 | T=0.544 |
The Genome Aggregation Database | American | Sub | 828 | G=0.320 | T=0.680 |
The Genome Aggregation Database | East Asian | Sub | 1610 | G=0.017 | T=0.983 |
The Genome Aggregation Database | Europe | Sub | 18470 | G=0.300 | T=0.699 |
The Genome Aggregation Database | Global | Study-wide | 29908 | G=0.331 | T=0.669 |
The Genome Aggregation Database | Other | Sub | 302 | G=0.290 | T=0.710 |
Trans-Omics for Precision Medicine | Global | Study-wide | 29118 | G=0.355 | T=0.644 |
UK 10K study - Twins | TWIN COHORT | Study-wide | 3708 | G=0.293 | T=0.707 |
PMID | Title | Author | Journal |
---|---|---|---|
20201924 | Genome-wide association study of alcohol dependence implicates a region on chromosome 11. | Edenberg HJ | Alcohol Clin Exp Res |
SNP ID | p-value | Traits | Study |
---|---|---|---|
rs4735183 | 0.00094 | alcohol dependence | 20201924 |
Position (v37) | eGene | GeneID | Variant | p-value | TSS | Tissue | |
---|---|---|---|---|---|---|---|
There is no eQTL annotation for this SNP |
Probe ID | Position | Gene | beta | p-value | |||
---|---|---|---|---|---|---|---|
There is no meQTL annotation for this SNP |
There is no significant Hi-C chromatin interaction data for this SNP.
Chromosome | Start | End | Region | Distance ( -/+ : Up/Downstream ) |
---|---|---|---|---|
chr8 | 93525666 | 93525886 | E067 | -43057 |
chr8 | 93525950 | 93526019 | E067 | -42924 |
chr8 | 93529410 | 93529516 | E067 | -39427 |
chr8 | 93529960 | 93530041 | E067 | -38902 |
chr8 | 93530150 | 93530339 | E067 | -38604 |
chr8 | 93550643 | 93550826 | E069 | -18117 |
chr8 | 93552018 | 93552913 | E069 | -16030 |
chr8 | 93526383 | 93526556 | E070 | -42387 |
chr8 | 93528550 | 93528856 | E070 | -40087 |
chr8 | 93531009 | 93531059 | E070 | -37884 |
chr8 | 93531072 | 93531112 | E070 | -37831 |
chr8 | 93576652 | 93576789 | E070 | 7709 |
chr8 | 93615184 | 93615262 | E070 | 46241 |
chr8 | 93615323 | 93615475 | E070 | 46380 |
chr8 | 93617903 | 93618683 | E070 | 48960 |
chr8 | 93618705 | 93618820 | E070 | 49762 |
chr8 | 93537772 | 93537856 | E071 | -31087 |
chr8 | 93550643 | 93550826 | E071 | -18117 |
chr8 | 93551705 | 93551827 | E071 | -17116 |
chr8 | 93551874 | 93551971 | E071 | -16972 |
chr8 | 93552018 | 93552913 | E071 | -16030 |
chr8 | 93568013 | 93568097 | E071 | -846 |
chr8 | 93568121 | 93568355 | E071 | -588 |
chr8 | 93599731 | 93600188 | E071 | 30788 |
chr8 | 93600197 | 93600352 | E071 | 31254 |
chr8 | 93550643 | 93550826 | E072 | -18117 |
chr8 | 93551705 | 93551827 | E072 | -17116 |
chr8 | 93551874 | 93551971 | E072 | -16972 |
chr8 | 93552018 | 93552913 | E072 | -16030 |
chr8 | 93599731 | 93600188 | E072 | 30788 |
chr8 | 93600197 | 93600352 | E072 | 31254 |
chr8 | 93552018 | 93552913 | E074 | -16030 |
chr8 | 93599520 | 93599664 | E074 | 30577 |
chr8 | 93599731 | 93600188 | E074 | 30788 |
chr8 | 93600197 | 93600352 | E074 | 31254 |
chr8 | 93520832 | 93520973 | E081 | -47970 |
chr8 | 93521034 | 93521084 | E081 | -47859 |
chr8 | 93521128 | 93521195 | E081 | -47748 |
chr8 | 93521262 | 93522368 | E081 | -46575 |
chr8 | 93525075 | 93525125 | E081 | -43818 |
chr8 | 93525268 | 93525469 | E081 | -43474 |
chr8 | 93525666 | 93525886 | E081 | -43057 |
chr8 | 93525950 | 93526019 | E081 | -42924 |
chr8 | 93526195 | 93526263 | E081 | -42680 |
chr8 | 93526383 | 93526556 | E081 | -42387 |
chr8 | 93528550 | 93528856 | E081 | -40087 |
chr8 | 93576652 | 93576789 | E081 | 7709 |
chr8 | 93576933 | 93576983 | E081 | 7990 |
chr8 | 93617156 | 93617442 | E081 | 48213 |
chr8 | 93617637 | 93617723 | E081 | 48694 |
chr8 | 93617732 | 93617863 | E081 | 48789 |
chr8 | 93617903 | 93618683 | E081 | 48960 |
chr8 | 93618705 | 93618820 | E081 | 49762 |
chr8 | 93525666 | 93525886 | E082 | -43057 |
chr8 | 93525950 | 93526019 | E082 | -42924 |
chr8 | 93526195 | 93526263 | E082 | -42680 |
chr8 | 93526383 | 93526556 | E082 | -42387 |
chr8 | 93528550 | 93528856 | E082 | -40087 |
chr8 | 93531430 | 93531665 | E082 | -37278 |
chr8 | 93531800 | 93531850 | E082 | -37093 |
chr8 | 93531874 | 93531959 | E082 | -36984 |
chr8 | 93532001 | 93532073 | E082 | -36870 |
chr8 | 93532395 | 93532785 | E082 | -36158 |
chr8 | 93533092 | 93533287 | E082 | -35656 |
chr8 | 93617903 | 93618683 | E082 | 48960 |
chr8 | 93618705 | 93618820 | E082 | 49762 |
Chromosome | Start | End | Region | Distance(-/+:Up/Downstream) |
---|---|---|---|---|
chr8 | 93526584 | 93528492 | E067 | -40451 |
chr8 | 93526584 | 93528492 | E071 | -40451 |
chr8 | 93526584 | 93528492 | E072 | -40451 |
chr8 | 93526584 | 93528492 | E073 | -40451 |
chr8 | 93526584 | 93528492 | E074 | -40451 |
chr8 | 93526584 | 93528492 | E082 | -40451 |