Sequence Name | Change(s) |
---|---|
GRCh38.p7 chr 12 | NC_000012.12:g.130970676T>G |
GRCh37.p13 chr 12 | NC_000012.11:g.131455221T>G |
Molecule type | Change | Amino acid[Codon] | SO Term |
---|---|---|---|
ADGRD1 transcript | NM_198827.3:c. | N/A | Intron Variant |
ADGRD1 transcript variant X4 | XM_005253566.2:c. | N/A | Intron Variant |
ADGRD1 transcript variant X1 | XM_011538203.2:c. | N/A | Intron Variant |
ADGRD1 transcript variant X1 | XM_011538204.2:c. | N/A | Intron Variant |
ADGRD1 transcript variant X2 | XM_011538205.2:c. | N/A | Intron Variant |
ADGRD1 transcript variant X3 | XM_011538206.2:c. | N/A | Intron Variant |
ADGRD1 transcript variant X5 | XM_011538207.2:c. | N/A | Intron Variant |
ADGRD1 transcript variant X6 | XM_011538208.2:c. | N/A | Intron Variant |
ADGRD1 transcript variant X7 | XM_011538209.2:c. | N/A | Intron Variant |
ADGRD1 transcript variant X8 | XM_011538210.2:c. | N/A | Intron Variant |
ADGRD1 transcript variant X9 | XM_011538211.2:c. | N/A | Genic Upstream Transcript Variant |
ADGRD1 transcript variant X10 | XM_011538212.2:c. | N/A | Genic Upstream Transcript Variant |
Study | Population | Group | Sample # | Ref Allele | Alt Allele |
---|---|---|---|---|---|
1000Genomes | African | Sub | 1322 | T=0.635 | G=0.365 |
1000Genomes | American | Sub | 694 | T=0.110 | G=0.890 |
1000Genomes | East Asian | Sub | 1008 | T=0.056 | G=0.944 |
1000Genomes | Europe | Sub | 1006 | T=0.060 | G=0.940 |
1000Genomes | Global | Study-wide | 5008 | T=0.228 | G=0.772 |
1000Genomes | South Asian | Sub | 978 | T=0.110 | G=0.890 |
The Avon Longitudinal Study of Parents and Children | PARENT AND CHILD COHORT | Study-wide | 3854 | T=0.053 | G=0.947 |
The Genome Aggregation Database | African | Sub | 8686 | T=0.559 | G=0.441 |
The Genome Aggregation Database | American | Sub | 838 | T=0.090 | G=0.910 |
The Genome Aggregation Database | East Asian | Sub | 1618 | T=0.041 | G=0.959 |
The Genome Aggregation Database | Europe | Sub | 18482 | T=0.054 | G=0.945 |
The Genome Aggregation Database | Global | Study-wide | 29926 | T=0.201 | G=0.798 |
The Genome Aggregation Database | Other | Sub | 302 | T=0.100 | G=0.900 |
Trans-Omics for Precision Medicine | Global | Study-wide | 29118 | T=0.283 | G=0.716 |
UK 10K study - Twins | TWIN COHORT | Study-wide | 3708 | T=0.059 | G=0.941 |
PMID | Title | Author | Journal |
---|---|---|---|
23942779 | A genome-wide association study of behavioral disinhibition. | McGue M | Behav Genet |
SNP ID | p-value | Traits | Study |
---|---|---|---|
rs4759814 | 9.6E-06 | alcohol dependence | 23942779 |
Position (v37) | eGene | GeneID | Variant | p-value | TSS | Tissue | |
---|---|---|---|---|---|---|---|
There is no eQTL annotation for this SNP |
Probe ID | Position | Gene | beta | p-value | |||
---|---|---|---|---|---|---|---|
There is no meQTL annotation for this SNP |
There is no significant Hi-C chromatin interaction data for this SNP.
Chromosome | Start | End | Region | Distance ( -/+ : Up/Downstream ) |
---|---|---|---|---|
chr12 | 131431049 | 131431124 | E067 | -24097 |
chr12 | 131467857 | 131468577 | E067 | 12636 |
chr12 | 131487416 | 131487485 | E067 | 32195 |
chr12 | 131487651 | 131487745 | E067 | 32430 |
chr12 | 131417497 | 131417577 | E068 | -37644 |
chr12 | 131417622 | 131417701 | E068 | -37520 |
chr12 | 131466687 | 131467068 | E068 | 11466 |
chr12 | 131467594 | 131467843 | E068 | 12373 |
chr12 | 131467857 | 131468577 | E068 | 12636 |
chr12 | 131491585 | 131492799 | E068 | 36364 |
chr12 | 131409582 | 131410552 | E069 | -44669 |
chr12 | 131410624 | 131410845 | E069 | -44376 |
chr12 | 131417497 | 131417577 | E069 | -37644 |
chr12 | 131417622 | 131417701 | E069 | -37520 |
chr12 | 131467594 | 131467843 | E069 | 12373 |
chr12 | 131467857 | 131468577 | E069 | 12636 |
chr12 | 131468892 | 131468946 | E069 | 13671 |
chr12 | 131468963 | 131469003 | E069 | 13742 |
chr12 | 131469142 | 131469209 | E069 | 13921 |
chr12 | 131470383 | 131470518 | E069 | 15162 |
chr12 | 131487331 | 131487385 | E069 | 32110 |
chr12 | 131487960 | 131488521 | E069 | 32739 |
chr12 | 131487960 | 131488521 | E070 | 32739 |
chr12 | 131491493 | 131491558 | E070 | 36272 |
chr12 | 131491585 | 131492799 | E070 | 36364 |
chr12 | 131500331 | 131500399 | E070 | 45110 |
chr12 | 131500618 | 131500876 | E070 | 45397 |
chr12 | 131500966 | 131501074 | E070 | 45745 |
chr12 | 131505109 | 131505169 | E070 | 49888 |
chr12 | 131409582 | 131410552 | E071 | -44669 |
chr12 | 131446195 | 131446301 | E071 | -8920 |
chr12 | 131467359 | 131467409 | E071 | 12138 |
chr12 | 131467516 | 131467570 | E071 | 12295 |
chr12 | 131467594 | 131467843 | E071 | 12373 |
chr12 | 131467857 | 131468577 | E071 | 12636 |
chr12 | 131468892 | 131468946 | E071 | 13671 |
chr12 | 131468963 | 131469003 | E071 | 13742 |
chr12 | 131491585 | 131492799 | E071 | 36364 |
chr12 | 131409582 | 131410552 | E072 | -44669 |
chr12 | 131417497 | 131417577 | E072 | -37644 |
chr12 | 131417622 | 131417701 | E072 | -37520 |
chr12 | 131467594 | 131467843 | E072 | 12373 |
chr12 | 131467857 | 131468577 | E072 | 12636 |
chr12 | 131486498 | 131487200 | E072 | 31277 |
chr12 | 131487331 | 131487385 | E072 | 32110 |
chr12 | 131487416 | 131487485 | E072 | 32195 |
chr12 | 131487651 | 131487745 | E072 | 32430 |
chr12 | 131490850 | 131490938 | E072 | 35629 |
chr12 | 131417497 | 131417577 | E073 | -37644 |
chr12 | 131417622 | 131417701 | E073 | -37520 |
chr12 | 131487331 | 131487385 | E073 | 32110 |
chr12 | 131487416 | 131487485 | E073 | 32195 |
chr12 | 131487651 | 131487745 | E073 | 32430 |
chr12 | 131490850 | 131490938 | E073 | 35629 |
chr12 | 131491018 | 131491068 | E073 | 35797 |
chr12 | 131491493 | 131491558 | E073 | 36272 |
chr12 | 131491585 | 131492799 | E073 | 36364 |
chr12 | 131409582 | 131410552 | E074 | -44669 |
chr12 | 131410624 | 131410845 | E074 | -44376 |
chr12 | 131467857 | 131468577 | E074 | 12636 |
chr12 | 131491585 | 131492799 | E074 | 36364 |
chr12 | 131432036 | 131432089 | E081 | -23132 |
chr12 | 131432098 | 131432182 | E081 | -23039 |
chr12 | 131432244 | 131432299 | E081 | -22922 |
chr12 | 131432514 | 131432577 | E081 | -22644 |
chr12 | 131432705 | 131433473 | E081 | -21748 |
chr12 | 131443239 | 131443573 | E081 | -11648 |
chr12 | 131487331 | 131487385 | E081 | 32110 |
chr12 | 131487416 | 131487485 | E081 | 32195 |
chr12 | 131487651 | 131487745 | E081 | 32430 |
chr12 | 131487960 | 131488521 | E081 | 32739 |
chr12 | 131489089 | 131489206 | E081 | 33868 |
chr12 | 131490042 | 131490233 | E081 | 34821 |
chr12 | 131490245 | 131490331 | E081 | 35024 |
chr12 | 131490850 | 131490938 | E081 | 35629 |
chr12 | 131491018 | 131491068 | E081 | 35797 |
chr12 | 131491493 | 131491558 | E081 | 36272 |
chr12 | 131491585 | 131492799 | E081 | 36364 |
chr12 | 131493285 | 131493389 | E081 | 38064 |
chr12 | 131493842 | 131493992 | E081 | 38621 |
chr12 | 131494172 | 131494286 | E081 | 38951 |
chr12 | 131494646 | 131494902 | E081 | 39425 |
chr12 | 131495025 | 131495313 | E081 | 39804 |
chr12 | 131505109 | 131505169 | E081 | 49888 |
chr12 | 131412812 | 131413513 | E082 | -41708 |
chr12 | 131473201 | 131473540 | E082 | 17980 |
chr12 | 131473557 | 131473687 | E082 | 18336 |
chr12 | 131473689 | 131474072 | E082 | 18468 |
chr12 | 131487331 | 131487385 | E082 | 32110 |
chr12 | 131487416 | 131487485 | E082 | 32195 |
chr12 | 131487651 | 131487745 | E082 | 32430 |
chr12 | 131487960 | 131488521 | E082 | 32739 |
chr12 | 131489089 | 131489206 | E082 | 33868 |
chr12 | 131491585 | 131492799 | E082 | 36364 |
chr12 | 131493285 | 131493389 | E082 | 38064 |
chr12 | 131493842 | 131493992 | E082 | 38621 |
chr12 | 131494172 | 131494286 | E082 | 38951 |
chr12 | 131494646 | 131494902 | E082 | 39425 |
chr12 | 131500331 | 131500399 | E082 | 45110 |
chr12 | 131500618 | 131500876 | E082 | 45397 |
chr12 | 131500966 | 131501074 | E082 | 45745 |
chr12 | 131505109 | 131505169 | E082 | 49888 |
Chromosome | Start | End | Region | Distance(-/+:Up/Downstream) |
---|---|---|---|---|
chr12 | 131439814 | 131440164 | E072 | -15057 |