SNP Detail Info-rs4761605

Sequence Name	Change(s)
GRCh38.p7 chr 12	NC_000012.12:g.94335801C>T
GRCh37.p13 chr 12	NC_000012.11:g.94729577C>T

Molecule type	Change	Amino acid[Codon]	SO Term
CEP83 transcript variant 2	NM_001042399.1:c.	N/A	Intron Variant
CEP83 transcript variant 1	NM_016122.2:c.	N/A	Intron Variant
CEP83 transcript variant X10	XM_006719437.2:c.	N/A	Intron Variant
CEP83 transcript variant X2	XM_011538424.1:c.	N/A	Intron Variant
CEP83 transcript variant X12	XM_011538427.2:c.	N/A	Intron Variant
CEP83 transcript variant X16	XM_011538429.2:c.	N/A	Intron Variant
CEP83 transcript variant X8	XM_017019385.1:c.	N/A	Intron Variant
CEP83 transcript variant X9	XM_017019386.1:c.	N/A	Intron Variant
CEP83 transcript variant X13	XM_017019387.1:c.	N/A	Intron Variant
CEP83 transcript variant X12	XM_017019388.1:c.	N/A	Intron Variant
CEP83 transcript variant X15	XM_017019389.1:c.	N/A	Intron Variant
CEP83 transcript variant X1	XR_001748731.1:n.	N/A	Intron Variant
CEP83 transcript variant X3	XR_001748732.1:n.	N/A	Intron Variant
CEP83 transcript variant X4	XR_001748733.1:n.	N/A	Intron Variant
CEP83 transcript variant X5	XR_001748734.1:n.	N/A	Intron Variant
CEP83 transcript variant X6	XR_001748735.1:n.	N/A	Intron Variant
CEP83 transcript variant X7	XR_001748736.1:n.	N/A	Intron Variant
CEP83 transcript variant X11	XR_001748737.1:n.	N/A	Intron Variant
CEP83 transcript variant X17	XR_001748738.1:n.	N/A	Intron Variant
CEP83 transcript variant X18	XR_001748739.1:n.	N/A	Intron Variant

Study	Population	Group	Sample #	Ref Allele	Alt Allele
1000Genomes	African	Sub	1322	C=0.962	T=0.038
1000Genomes	American	Sub	694	C=0.870	T=0.130
1000Genomes	East Asian	Sub	1008	C=0.941	T=0.059
1000Genomes	Europe	Sub	1006	C=0.879	T=0.121
1000Genomes	Global	Study-wide	5008	C=0.924	T=0.076
1000Genomes	South Asian	Sub	978	C=0.940	T=0.060
The Avon Longitudinal Study of Parents and Children	PARENT AND CHILD COHORT	Study-wide	3854	C=0.884	T=0.116
The Genome Aggregation Database	African	Sub	8728	C=0.958	T=0.042
The Genome Aggregation Database	American	Sub	836	C=0.830	T=0.170
The Genome Aggregation Database	East Asian	Sub	1618	C=0.943	T=0.057
The Genome Aggregation Database	Europe	Sub	18466	C=0.890	T=0.109
The Genome Aggregation Database	Global	Study-wide	29948	C=0.911	T=0.088
The Genome Aggregation Database	Other	Sub	300	C=0.870	T=0.130
Trans-Omics for Precision Medicine	Global	Study-wide	29118	C=0.907	T=0.092
UK 10K study - Twins	TWIN COHORT	Study-wide	3708	C=0.888	T=0.112

PMID	Title	Author	Journal
19581569	Genome-wide association study of alcohol dependence.	Treutlein J	Arch Gen Psychiatry

SNP ID	p-value	Traits	Study
rs4761605	1.64E-05	alcohol dependence	19581569

Position (v37)	eGene	GeneID	Variant	p-value	TSS	Tissue
There is no eQTL annotation for this SNP

Probe ID	Position	Gene	beta	p-value
There is no meQTL annotation for this SNP

Chromosome	Start	End	Region	Distance ( -/+ : Up/Downstream )
chr12	94683191	94684503	E067	-45074
chr12	94679910	94680004	E068	-49573
chr12	94680042	94680117	E068	-49460
chr12	94680142	94680240	E068	-49337
chr12	94680319	94680369	E068	-49208
chr12	94680499	94681277	E068	-48300
chr12	94679801	94679849	E070	-49728
chr12	94679910	94680004	E070	-49573
chr12	94680042	94680117	E070	-49460
chr12	94680142	94680240	E070	-49337
chr12	94680319	94680369	E070	-49208
chr12	94680499	94681277	E070	-48300
chr12	94681360	94681533	E070	-48044
chr12	94683191	94684503	E070	-45074
chr12	94684662	94684799	E070	-44778
chr12	94684829	94684877	E070	-44700
chr12	94698030	94698114	E070	-31463
chr12	94698292	94699706	E070	-29871
chr12	94735609	94735690	E070	6032
chr12	94683191	94684503	E074	-45074
chr12	94683191	94684503	E081	-45074
chr12	94680042	94680117	E082	-49460
chr12	94680142	94680240	E082	-49337
chr12	94680319	94680369	E082	-49208
chr12	94680499	94681277	E082	-48300

rs4761605