| Sequence Name | Change(s) |
|---|---|
| GRCh38.p7 chr 20 | NC_000020.11:g.57631253G>A |
| GRCh37.p13 chr 20 | NC_000020.10:g.56206309G>A |
| Study | Population | Group | Sample # | Ref Allele | Alt Allele |
|---|---|---|---|---|---|
| 1000Genomes | African | Sub | 1322 | G=0.922 | A=0.078 |
| 1000Genomes | American | Sub | 694 | G=0.640 | A=0.360 |
| 1000Genomes | East Asian | Sub | 1008 | G=0.850 | A=0.150 |
| 1000Genomes | Europe | Sub | 1006 | G=0.532 | A=0.468 |
| 1000Genomes | Global | Study-wide | 5008 | G=0.743 | A=0.257 |
| 1000Genomes | South Asian | Sub | 978 | G=0.680 | A=0.320 |
| The Avon Longitudinal Study of Parents and Children | PARENT AND CHILD COHORT | Study-wide | 3854 | G=0.476 | A=0.524 |
| The Genome Aggregation Database | African | Sub | 8728 | G=0.853 | A=0.147 |
| The Genome Aggregation Database | American | Sub | 838 | G=0.610 | A=0.390 |
| The Genome Aggregation Database | East Asian | Sub | 1622 | G=0.856 | A=0.144 |
| The Genome Aggregation Database | Europe | Sub | 18456 | G=0.517 | A=0.482 |
| The Genome Aggregation Database | Global | Study-wide | 29946 | G=0.636 | A=0.363 |
| The Genome Aggregation Database | Other | Sub | 302 | G=0.570 | A=0.430 |
| Trans-Omics for Precision Medicine | Global | Study-wide | 29118 | G=0.681 | A=0.318 |
| UK 10K study - Twins | TWIN COHORT | Study-wide | 3708 | G=0.499 | A=0.501 |
| PMID | Title | Author | Journal |
|---|---|---|---|
| 17158188 | Novel genes identified in a high-density genome wide association study for nicotine dependence. | Bierut LJ | Hum Mol Genet |
| 21556359 | Novel autism subtype-dependent genetic variants are revealed by quantitative trait and subphenotype association analyses of published GWAS data. | Hu VW | PLoS One |
| SNP ID | p-value | Traits | Study |
|---|---|---|---|
| rs4811895 | 0.000392 | nicotine dependence | 17158188 |
| Position (v37) | eGene | GeneID | Variant | p-value | TSS | Tissue | |
|---|---|---|---|---|---|---|---|
| There is no eQTL annotation for this SNP | |||||||
| Probe ID | Position | Gene | beta | p-value | |||
|---|---|---|---|---|---|---|---|
| There is no meQTL annotation for this SNP | |||||||
There is no significant Hi-C chromatin interaction data for this SNP.
| Chromosome | Start | End | Region | Distance ( -/+ : Up/Downstream ) |
|---|---|---|---|---|
| chr20 | 56156693 | 56156810 | E067 | -49499 |
| chr20 | 56156878 | 56157063 | E067 | -49246 |
| chr20 | 56157069 | 56157263 | E067 | -49046 |
| chr20 | 56157270 | 56157320 | E067 | -48989 |
| chr20 | 56157396 | 56158502 | E067 | -47807 |
| chr20 | 56235796 | 56236038 | E067 | 29487 |
| chr20 | 56236850 | 56237049 | E067 | 30541 |
| chr20 | 56237140 | 56237724 | E067 | 30831 |
| chr20 | 56237749 | 56237873 | E067 | 31440 |
| chr20 | 56237876 | 56237966 | E067 | 31567 |
| chr20 | 56238170 | 56238220 | E067 | 31861 |
| chr20 | 56238325 | 56238375 | E067 | 32016 |
| chr20 | 56247790 | 56247907 | E067 | 41481 |
| chr20 | 56247953 | 56248057 | E067 | 41644 |
| chr20 | 56156400 | 56156501 | E068 | -49808 |
| chr20 | 56156511 | 56156616 | E068 | -49693 |
| chr20 | 56156693 | 56156810 | E068 | -49499 |
| chr20 | 56156878 | 56157063 | E068 | -49246 |
| chr20 | 56157069 | 56157263 | E068 | -49046 |
| chr20 | 56157396 | 56158502 | E068 | -47807 |
| chr20 | 56158656 | 56158853 | E068 | -47456 |
| chr20 | 56161284 | 56161350 | E068 | -44959 |
| chr20 | 56187641 | 56187691 | E068 | -18618 |
| chr20 | 56232350 | 56233237 | E068 | 26041 |
| chr20 | 56233567 | 56233663 | E068 | 27258 |
| chr20 | 56233711 | 56233842 | E068 | 27402 |
| chr20 | 56233963 | 56234132 | E068 | 27654 |
| chr20 | 56234142 | 56234247 | E068 | 27833 |
| chr20 | 56234304 | 56234374 | E068 | 27995 |
| chr20 | 56234394 | 56234591 | E068 | 28085 |
| chr20 | 56236214 | 56236693 | E068 | 29905 |
| chr20 | 56236850 | 56237049 | E068 | 30541 |
| chr20 | 56237140 | 56237724 | E068 | 30831 |
| chr20 | 56237749 | 56237873 | E068 | 31440 |
| chr20 | 56237876 | 56237966 | E068 | 31567 |
| chr20 | 56238170 | 56238220 | E068 | 31861 |
| chr20 | 56238325 | 56238375 | E068 | 32016 |
| chr20 | 56243081 | 56243337 | E068 | 36772 |
| chr20 | 56243348 | 56243432 | E068 | 37039 |
| chr20 | 56243452 | 56243719 | E068 | 37143 |
| chr20 | 56243766 | 56243826 | E068 | 37457 |
| chr20 | 56246787 | 56247746 | E068 | 40478 |
| chr20 | 56247790 | 56247907 | E068 | 41481 |
| chr20 | 56247953 | 56248057 | E068 | 41644 |
| chr20 | 56248366 | 56248455 | E068 | 42057 |
| chr20 | 56248559 | 56248639 | E068 | 42250 |
| chr20 | 56248737 | 56248924 | E068 | 42428 |
| chr20 | 56249105 | 56249195 | E068 | 42796 |
| chr20 | 56249346 | 56249396 | E068 | 43037 |
| chr20 | 56250478 | 56250518 | E068 | 44169 |
| chr20 | 56251207 | 56251263 | E068 | 44898 |
| chr20 | 56251342 | 56251480 | E068 | 45033 |
| chr20 | 56251485 | 56251616 | E068 | 45176 |
| chr20 | 56251667 | 56251975 | E068 | 45358 |
| chr20 | 56252140 | 56252275 | E068 | 45831 |
| chr20 | 56252281 | 56252722 | E068 | 45972 |
| chr20 | 56252915 | 56252965 | E068 | 46606 |
| chr20 | 56253175 | 56253225 | E068 | 46866 |
| chr20 | 56253244 | 56253333 | E068 | 46935 |
| chr20 | 56253453 | 56253984 | E068 | 47144 |
| chr20 | 56156693 | 56156810 | E069 | -49499 |
| chr20 | 56156878 | 56157063 | E069 | -49246 |
| chr20 | 56157069 | 56157263 | E069 | -49046 |
| chr20 | 56157270 | 56157320 | E069 | -48989 |
| chr20 | 56157396 | 56158502 | E069 | -47807 |
| chr20 | 56187151 | 56187221 | E069 | -19088 |
| chr20 | 56187222 | 56187313 | E069 | -18996 |
| chr20 | 56187514 | 56187637 | E069 | -18672 |
| chr20 | 56187641 | 56187691 | E069 | -18618 |
| chr20 | 56233567 | 56233663 | E069 | 27258 |
| chr20 | 56236214 | 56236693 | E069 | 29905 |
| chr20 | 56236850 | 56237049 | E069 | 30541 |
| chr20 | 56237140 | 56237724 | E069 | 30831 |
| chr20 | 56237749 | 56237873 | E069 | 31440 |
| chr20 | 56237876 | 56237966 | E069 | 31567 |
| chr20 | 56238170 | 56238220 | E069 | 31861 |
| chr20 | 56238325 | 56238375 | E069 | 32016 |
| chr20 | 56246787 | 56247746 | E069 | 40478 |
| chr20 | 56253453 | 56253984 | E069 | 47144 |
| chr20 | 56157396 | 56158502 | E070 | -47807 |
| chr20 | 56234690 | 56234763 | E070 | 28381 |
| chr20 | 56235088 | 56235150 | E070 | 28779 |
| chr20 | 56235796 | 56236038 | E070 | 29487 |
| chr20 | 56236214 | 56236693 | E070 | 29905 |
| chr20 | 56236850 | 56237049 | E070 | 30541 |
| chr20 | 56237140 | 56237724 | E070 | 30831 |
| chr20 | 56237749 | 56237873 | E070 | 31440 |
| chr20 | 56237876 | 56237966 | E070 | 31567 |
| chr20 | 56238170 | 56238220 | E070 | 31861 |
| chr20 | 56238325 | 56238375 | E070 | 32016 |
| chr20 | 56238587 | 56238648 | E070 | 32278 |
| chr20 | 56241304 | 56241415 | E070 | 34995 |
| chr20 | 56241431 | 56241481 | E070 | 35122 |
| chr20 | 56241616 | 56241678 | E070 | 35307 |
| chr20 | 56241794 | 56241866 | E070 | 35485 |
| chr20 | 56241870 | 56241914 | E070 | 35561 |
| chr20 | 56242048 | 56242197 | E070 | 35739 |
| chr20 | 56242198 | 56242272 | E070 | 35889 |
| chr20 | 56242317 | 56242414 | E070 | 36008 |
| chr20 | 56242579 | 56242824 | E070 | 36270 |
| chr20 | 56243081 | 56243337 | E070 | 36772 |
| chr20 | 56243348 | 56243432 | E070 | 37039 |
| chr20 | 56243452 | 56243719 | E070 | 37143 |
| chr20 | 56243766 | 56243826 | E070 | 37457 |
| chr20 | 56244935 | 56245055 | E070 | 38626 |
| chr20 | 56245353 | 56245476 | E070 | 39044 |
| chr20 | 56245525 | 56245605 | E070 | 39216 |
| chr20 | 56245656 | 56245738 | E070 | 39347 |
| chr20 | 56245874 | 56245924 | E070 | 39565 |
| chr20 | 56245993 | 56246068 | E070 | 39684 |
| chr20 | 56248366 | 56248455 | E070 | 42057 |
| chr20 | 56248559 | 56248639 | E070 | 42250 |
| chr20 | 56248737 | 56248924 | E070 | 42428 |
| chr20 | 56249105 | 56249195 | E070 | 42796 |
| chr20 | 56249346 | 56249396 | E070 | 43037 |
| chr20 | 56249600 | 56249650 | E070 | 43291 |
| chr20 | 56249795 | 56249889 | E070 | 43486 |
| chr20 | 56252140 | 56252275 | E070 | 45831 |
| chr20 | 56252281 | 56252722 | E070 | 45972 |
| chr20 | 56253244 | 56253333 | E070 | 46935 |
| chr20 | 56253453 | 56253984 | E070 | 47144 |
| chr20 | 56156693 | 56156810 | E071 | -49499 |
| chr20 | 56156878 | 56157063 | E071 | -49246 |
| chr20 | 56157069 | 56157263 | E071 | -49046 |
| chr20 | 56157270 | 56157320 | E071 | -48989 |
| chr20 | 56157396 | 56158502 | E071 | -47807 |
| chr20 | 56158656 | 56158853 | E071 | -47456 |
| chr20 | 56158991 | 56159067 | E071 | -47242 |
| chr20 | 56186558 | 56186713 | E071 | -19596 |
| chr20 | 56186715 | 56186765 | E071 | -19544 |
| chr20 | 56186782 | 56186873 | E071 | -19436 |
| chr20 | 56187151 | 56187221 | E071 | -19088 |
| chr20 | 56202667 | 56202811 | E071 | -3498 |
| chr20 | 56235796 | 56236038 | E071 | 29487 |
| chr20 | 56236214 | 56236693 | E071 | 29905 |
| chr20 | 56236850 | 56237049 | E071 | 30541 |
| chr20 | 56237140 | 56237724 | E071 | 30831 |
| chr20 | 56237749 | 56237873 | E071 | 31440 |
| chr20 | 56237876 | 56237966 | E071 | 31567 |
| chr20 | 56238170 | 56238220 | E071 | 31861 |
| chr20 | 56238325 | 56238375 | E071 | 32016 |
| chr20 | 56238587 | 56238648 | E071 | 32278 |
| chr20 | 56247790 | 56247907 | E071 | 41481 |
| chr20 | 56247953 | 56248057 | E071 | 41644 |
| chr20 | 56250478 | 56250518 | E071 | 44169 |
| chr20 | 56250596 | 56250729 | E071 | 44287 |
| chr20 | 56250890 | 56251051 | E071 | 44581 |
| chr20 | 56251207 | 56251263 | E071 | 44898 |
| chr20 | 56251342 | 56251480 | E071 | 45033 |
| chr20 | 56251485 | 56251616 | E071 | 45176 |
| chr20 | 56251667 | 56251975 | E071 | 45358 |
| chr20 | 56252140 | 56252275 | E071 | 45831 |
| chr20 | 56252281 | 56252722 | E071 | 45972 |
| chr20 | 56252915 | 56252965 | E071 | 46606 |
| chr20 | 56253175 | 56253225 | E071 | 46866 |
| chr20 | 56253244 | 56253333 | E071 | 46935 |
| chr20 | 56253453 | 56253984 | E071 | 47144 |
| chr20 | 56254030 | 56254161 | E071 | 47721 |
| chr20 | 56254234 | 56254594 | E071 | 47925 |
| chr20 | 56156511 | 56156616 | E072 | -49693 |
| chr20 | 56156693 | 56156810 | E072 | -49499 |
| chr20 | 56156878 | 56157063 | E072 | -49246 |
| chr20 | 56157069 | 56157263 | E072 | -49046 |
| chr20 | 56157270 | 56157320 | E072 | -48989 |
| chr20 | 56157396 | 56158502 | E072 | -47807 |
| chr20 | 56158656 | 56158853 | E072 | -47456 |
| chr20 | 56158991 | 56159067 | E072 | -47242 |
| chr20 | 56187151 | 56187221 | E072 | -19088 |
| chr20 | 56187222 | 56187313 | E072 | -18996 |
| chr20 | 56187514 | 56187637 | E072 | -18672 |
| chr20 | 56187641 | 56187691 | E072 | -18618 |
| chr20 | 56235796 | 56236038 | E072 | 29487 |
| chr20 | 56236850 | 56237049 | E072 | 30541 |
| chr20 | 56237140 | 56237724 | E072 | 30831 |
| chr20 | 56237749 | 56237873 | E072 | 31440 |
| chr20 | 56237876 | 56237966 | E072 | 31567 |
| chr20 | 56238170 | 56238220 | E072 | 31861 |
| chr20 | 56246787 | 56247746 | E072 | 40478 |
| chr20 | 56247790 | 56247907 | E072 | 41481 |
| chr20 | 56247953 | 56248057 | E072 | 41644 |
| chr20 | 56248366 | 56248455 | E072 | 42057 |
| chr20 | 56248559 | 56248639 | E072 | 42250 |
| chr20 | 56253453 | 56253984 | E072 | 47144 |
| chr20 | 56156400 | 56156501 | E073 | -49808 |
| chr20 | 56156511 | 56156616 | E073 | -49693 |
| chr20 | 56156693 | 56156810 | E073 | -49499 |
| chr20 | 56156878 | 56157063 | E073 | -49246 |
| chr20 | 56157069 | 56157263 | E073 | -49046 |
| chr20 | 56157270 | 56157320 | E073 | -48989 |
| chr20 | 56157396 | 56158502 | E073 | -47807 |
| chr20 | 56158656 | 56158853 | E073 | -47456 |
| chr20 | 56158991 | 56159067 | E073 | -47242 |
| chr20 | 56235796 | 56236038 | E073 | 29487 |
| chr20 | 56236214 | 56236693 | E073 | 29905 |
| chr20 | 56236850 | 56237049 | E073 | 30541 |
| chr20 | 56237140 | 56237724 | E073 | 30831 |
| chr20 | 56247790 | 56247907 | E073 | 41481 |
| chr20 | 56247953 | 56248057 | E073 | 41644 |
| chr20 | 56249600 | 56249650 | E073 | 43291 |
| chr20 | 56251667 | 56251975 | E073 | 45358 |
| chr20 | 56252140 | 56252275 | E073 | 45831 |
| chr20 | 56156878 | 56157063 | E074 | -49246 |
| chr20 | 56157069 | 56157263 | E074 | -49046 |
| chr20 | 56157270 | 56157320 | E074 | -48989 |
| chr20 | 56157396 | 56158502 | E074 | -47807 |
| chr20 | 56158656 | 56158853 | E074 | -47456 |
| chr20 | 56158991 | 56159067 | E074 | -47242 |
| chr20 | 56186782 | 56186873 | E074 | -19436 |
| chr20 | 56187151 | 56187221 | E074 | -19088 |
| chr20 | 56187222 | 56187313 | E074 | -18996 |
| chr20 | 56187514 | 56187637 | E074 | -18672 |
| chr20 | 56187641 | 56187691 | E074 | -18618 |
| chr20 | 56202667 | 56202811 | E074 | -3498 |
| chr20 | 56235796 | 56236038 | E074 | 29487 |
| chr20 | 56236214 | 56236693 | E074 | 29905 |
| chr20 | 56236850 | 56237049 | E074 | 30541 |
| chr20 | 56237140 | 56237724 | E074 | 30831 |
| chr20 | 56237749 | 56237873 | E074 | 31440 |
| chr20 | 56237876 | 56237966 | E074 | 31567 |
| chr20 | 56238170 | 56238220 | E074 | 31861 |
| chr20 | 56238325 | 56238375 | E074 | 32016 |
| chr20 | 56238587 | 56238648 | E074 | 32278 |
| chr20 | 56239005 | 56239076 | E074 | 32696 |
| chr20 | 56243081 | 56243337 | E074 | 36772 |
| chr20 | 56243348 | 56243432 | E074 | 37039 |
| chr20 | 56246787 | 56247746 | E074 | 40478 |
| chr20 | 56247790 | 56247907 | E074 | 41481 |
| chr20 | 56247953 | 56248057 | E074 | 41644 |
| chr20 | 56248366 | 56248455 | E074 | 42057 |
| chr20 | 56252915 | 56252965 | E074 | 46606 |
| chr20 | 56253453 | 56253984 | E074 | 47144 |
| chr20 | 56254596 | 56256097 | E074 | 48287 |
| chr20 | 56171775 | 56171845 | E081 | -34464 |
| chr20 | 56171849 | 56172588 | E081 | -33721 |
| chr20 | 56202667 | 56202811 | E081 | -3498 |
| chr20 | 56235796 | 56236038 | E081 | 29487 |
| chr20 | 56236214 | 56236693 | E081 | 29905 |
| chr20 | 56236850 | 56237049 | E081 | 30541 |
| chr20 | 56242317 | 56242414 | E081 | 36008 |
| chr20 | 56242579 | 56242824 | E081 | 36270 |
| chr20 | 56243081 | 56243337 | E081 | 36772 |
| chr20 | 56245525 | 56245605 | E081 | 39216 |
| chr20 | 56245656 | 56245738 | E081 | 39347 |
| chr20 | 56245874 | 56245924 | E081 | 39565 |
| chr20 | 56245993 | 56246068 | E081 | 39684 |
| chr20 | 56246129 | 56246213 | E081 | 39820 |
| chr20 | 56246507 | 56246638 | E081 | 40198 |
| chr20 | 56246787 | 56247746 | E081 | 40478 |
| chr20 | 56247790 | 56247907 | E081 | 41481 |
| chr20 | 56247953 | 56248057 | E081 | 41644 |
| chr20 | 56248366 | 56248455 | E081 | 42057 |
| chr20 | 56248559 | 56248639 | E081 | 42250 |
| chr20 | 56248737 | 56248924 | E081 | 42428 |
| chr20 | 56252140 | 56252275 | E081 | 45831 |
| chr20 | 56252281 | 56252722 | E081 | 45972 |
| chr20 | 56253244 | 56253333 | E081 | 46935 |
| chr20 | 56253453 | 56253984 | E081 | 47144 |
| chr20 | 56157396 | 56158502 | E082 | -47807 |
| chr20 | 56234690 | 56234763 | E082 | 28381 |
| chr20 | 56244935 | 56245055 | E082 | 38626 |
| chr20 | 56245353 | 56245476 | E082 | 39044 |
| chr20 | 56245525 | 56245605 | E082 | 39216 |
| chr20 | 56245656 | 56245738 | E082 | 39347 |
| chr20 | 56246507 | 56246638 | E082 | 40198 |
| chr20 | 56247953 | 56248057 | E082 | 41644 |
| chr20 | 56248366 | 56248455 | E082 | 42057 |
| chr20 | 56248559 | 56248639 | E082 | 42250 |
| chr20 | 56253175 | 56253225 | E082 | 46866 |
| chr20 | 56253244 | 56253333 | E082 | 46935 |
| chr20 | 56253453 | 56253984 | E082 | 47144 |
| chr20 | 56254030 | 56254161 | E082 | 47721 |
| chr20 | 56254234 | 56254594 | E082 | 47925 |