SNP Detail Info-rs4832336

Organism: Homo sapiens

Alleles: G>A / G>C

Gene : Feature

None

p-value: Check p-value

Variation Type: SNV (Single Nucleotide Variation)

Frequency:

A=0291 (8705/29874,GnomAD)
A=0307 (8960/29116,TOPMED)
A=0318 (1591/5008,1000G)
A=0230 (887/3854,ALSPAC)
A=0236 (875/3708,TWINSUK)

Position: chr2:83830839 (GRCh38.p7) (2p11.2)

Phenotype: AD

Dataset:

GWASdb2

Publications: 1 publication(s)

Genomic View: See rs on genome

Enhancer: 0 Enhancer around

Promoter: 0 Promoter around

Study	Population	Group	Sample #	Ref Allele	Alt Allele
1000Genomes	African	Sub	1322	G=0.675	A=0.325
1000Genomes	American	Sub	694	G=0.660	A=0.340
1000Genomes	East Asian	Sub	1008	G=0.500	A=0.500
1000Genomes	Europe	Sub	1006	G=0.744	A=0.256
1000Genomes	Global	Study-wide	5008	G=0.682	A=0.318
1000Genomes	South Asian	Sub	978	G=0.830	A=0.170
The Avon Longitudinal Study of Parents and Children	PARENT AND CHILD COHORT	Study-wide	3854	G=0.770	A=0.230
The Genome Aggregation Database	African	Sub	8666	G=0.682	A=0.318
The Genome Aggregation Database	American	Sub	838	G=0.600	A=0.400
The Genome Aggregation Database	East Asian	Sub	1610	G=0.499	A=0.501
The Genome Aggregation Database	Europe	Sub	18458	G=0.743	A=0.256
The Genome Aggregation Database	Global	Study-wide	29874	G=0.708	A=0.291
The Genome Aggregation Database	Other	Sub	302	G=0.780	A=0.220
Trans-Omics for Precision Medicine	Global	Study-wide	29116	G=0.692	A=0.307
UK 10K study - Twins	TWIN COHORT	Study-wide	3708	G=0.764	A=0.236

PMID	Title	Author	Journal
20201924	Genome-wide association study of alcohol dependence implicates a region on chromosome 11.	Edenberg HJ	Alcohol Clin Exp Res

SNP ID	p-value	Traits	Study
rs4832336	0.00051	alcohol dependence	20201924

Position (v37)	eGene	GeneID	Variant	p-value	TSS	Tissue
There is no eQTL annotation for this SNP

Probe ID	Position	Gene	beta	p-value
There is no meQTL annotation for this SNP

rs4832336