SNP Detail Info-rs4833652

Organism: Homo sapiens

Alleles: A>G

Gene : Feature

None

p-value: Check p-value

Variation Type: SNV (Single Nucleotide Variation)

Frequency:

G=0345 (10322/29880,GnomAD)
G=0407 (11858/29118,TOPMED)
G=0299 (1497/5008,1000G)
G=0296 (1142/3854,ALSPAC)
G=0290 (1076/3708,TWINSUK)

Position: chr4:120553417 (GRCh38.p7) (4q27)

Phenotype: ND

Dataset:

GWASdb2

Publications: 1 publication(s)

Genomic View: See rs on genome

Enhancer: 0 Enhancer around

Promoter: 0 Promoter around

Sequence Name	Change(s)
GRCh38.p7 chr 4	NC_000004.12:g.120553417A>G
GRCh37.p13 chr 4	NC_000004.11:g.121474572A>G

Study	Population	Group	Sample #	Ref Allele	Alt Allele
1000Genomes	African	Sub	1322	A=0.437	G=0.563
1000Genomes	American	Sub	694	A=0.750	G=0.250
1000Genomes	East Asian	Sub	1008	A=0.896	G=0.104
1000Genomes	Europe	Sub	1006	A=0.697	G=0.303
1000Genomes	Global	Study-wide	5008	A=0.701	G=0.299
1000Genomes	South Asian	Sub	978	A=0.830	G=0.170
The Avon Longitudinal Study of Parents and Children	PARENT AND CHILD COHORT	Study-wide	3854	A=0.704	G=0.296
The Genome Aggregation Database	African	Sub	8698	A=0.461	G=0.539
The Genome Aggregation Database	American	Sub	824	A=0.780	G=0.220
The Genome Aggregation Database	East Asian	Sub	1614	A=0.873	G=0.127
The Genome Aggregation Database	Europe	Sub	18444	A=0.721	G=0.278
The Genome Aggregation Database	Global	Study-wide	29880	A=0.654	G=0.345
The Genome Aggregation Database	Other	Sub	300	A=0.650	G=0.350
Trans-Omics for Precision Medicine	Global	Study-wide	29118	A=0.592	G=0.407
UK 10K study - Twins	TWIN COHORT	Study-wide	3708	A=0.710	G=0.290

PMID	Title	Author	Journal
19268276	Genome-wide association study of smoking initiation and current smoking.	Vink JM	Am J Hum Genet

SNP ID	p-value	Traits	Study
rs4833652	3.41E-05	nicotine smoking	19268276

Position (v37)	eGene	GeneID	Variant	p-value	TSS	Tissue
There is no eQTL annotation for this SNP

Probe ID	Position	Gene	beta	p-value
There is no meQTL annotation for this SNP

rs4833652