rs4835803

Homo sapiens
C>T
None
Check p-value
SNV (Single Nucleotide Variation)
T=0114 (3438/29968,GnomAD)
T=0118 (3449/29118,TOPMED)
T=0146 (731/5008,1000G)
T=0124 (477/3854,ALSPAC)
T=0123 (457/3708,TWINSUK)
chr5:122516836 (GRCh38.p7) (5q23.2)
AD
GWASdb2
1   publication(s)
See rs on genome
3 Enhancers around
0 Promoter around

Genomic Coordinates

Sequence Name Change(s)
GRCh38.p7 chr 5NC_000005.10:g.122516836C>T
GRCh37.p13 chr 5NC_000005.9:g.121852531C>T

Population Frequency

Study Population Group Sample # Ref Allele Alt Allele
1000GenomesAfricanSub1322C=0.933T=0.067
1000GenomesAmericanSub694C=0.810T=0.190
1000GenomesEast AsianSub1008C=0.728T=0.272
1000GenomesEuropeSub1006C=0.860T=0.140
1000GenomesGlobalStudy-wide5008C=0.854T=0.146
1000GenomesSouth AsianSub978C=0.900T=0.100
The Avon Longitudinal Study of Parents and ChildrenPARENT AND CHILD COHORTStudy-wide3854C=0.876T=0.124
The Genome Aggregation DatabaseAfricanSub8728C=0.929T=0.071
The Genome Aggregation DatabaseAmericanSub838C=0.820T=0.180
The Genome Aggregation DatabaseEast AsianSub1614C=0.739T=0.261
The Genome Aggregation DatabaseEuropeSub18488C=0.882T=0.117
The Genome Aggregation DatabaseGlobalStudy-wide29968C=0.885T=0.114
The Genome Aggregation DatabaseOtherSub300C=0.760T=0.240
Trans-Omics for Precision MedicineGlobalStudy-wide29118C=0.881T=0.118
UK 10K study - TwinsTWIN COHORTStudy-wide3708C=0.877T=0.123
PMID Title Author Journal
23743675A meta-analysis of two genome-wide association studies to identify novel loci for maximum number of alcoholic drinks.Kapoor MHum Genet

P-Value

SNP ID p-value Traits Study
rs48358030.000105alcohol consumption23743675

eQTL of rs4835803 in Brain tissues (GTEx Analysis Release V7)

Position (v37) eGene GeneID Variant p-value TSS Tissue
There is no eQTL annotation for this SNP

meQTL of rs4835803 in Fetal Brain

Probe ID Position Gene beta p-value
There is no meQTL annotation for this SNP

Genomic View

Chromatin Interaction

There is no significant Hi-C chromatin interaction data for this SNP.

Enhancer Annotation (GRCh37.p13)

Chromosome Start End Region Distance ( -/+ : Up/Downstream )
chr5121896868121896918E07044337
chr5121836302121837161E071-15370
chr5121836302121837161E082-15370