rs4836019

Homo sapiens
A>T
None
Check p-value
SNV (Single Nucleotide Variation)
T=0114 (3432/29976,GnomAD)
T=0119 (3486/29118,TOPMED)
T=0144 (722/5008,1000G)
T=0124 (478/3854,ALSPAC)
T=0124 (458/3708,TWINSUK)
chr5:122517722 (GRCh38.p7) (5q23.2)
AD
GWASdb2
1   publication(s)
See rs on genome
3 Enhancers around
0 Promoter around

Genomic Coordinates

Sequence Name Change(s)
GRCh38.p7 chr 5NC_000005.10:g.122517722A>T
GRCh37.p13 chr 5NC_000005.9:g.121853417A>T

Population Frequency

Study Population Group Sample # Ref Allele Alt Allele
1000GenomesAfricanSub1322A=0.931T=0.069
1000GenomesAmericanSub694A=0.810T=0.190
1000GenomesEast AsianSub1008A=0.739T=0.261
1000GenomesEuropeSub1006A=0.860T=0.140
1000GenomesGlobalStudy-wide5008A=0.856T=0.144
1000GenomesSouth AsianSub978A=0.900T=0.100
The Avon Longitudinal Study of Parents and ChildrenPARENT AND CHILD COHORTStudy-wide3854A=0.876T=0.124
The Genome Aggregation DatabaseAfricanSub8728A=0.927T=0.073
The Genome Aggregation DatabaseAmericanSub838A=0.820T=0.180
The Genome Aggregation DatabaseEast AsianSub1620A=0.757T=0.243
The Genome Aggregation DatabaseEuropeSub18488A=0.882T=0.117
The Genome Aggregation DatabaseGlobalStudy-wide29976A=0.885T=0.114
The Genome Aggregation DatabaseOtherSub302A=0.760T=0.240
Trans-Omics for Precision MedicineGlobalStudy-wide29118A=0.880T=0.119
UK 10K study - TwinsTWIN COHORTStudy-wide3708A=0.876T=0.124
PMID Title Author Journal
23743675A meta-analysis of two genome-wide association studies to identify novel loci for maximum number of alcoholic drinks.Kapoor MHum Genet

P-Value

SNP ID p-value Traits Study
rs48360190.000114alcohol consumption23743675

eQTL of rs4836019 in Brain tissues (GTEx Analysis Release V7)

Position (v37) eGene GeneID Variant p-value TSS Tissue
There is no eQTL annotation for this SNP

meQTL of rs4836019 in Fetal Brain

Probe ID Position Gene beta p-value
There is no meQTL annotation for this SNP

Genomic View

Chromatin Interaction

There is no significant Hi-C chromatin interaction data for this SNP.

Enhancer Annotation (GRCh37.p13)

Chromosome Start End Region Distance ( -/+ : Up/Downstream )
chr5121896868121896918E07043451
chr5121836302121837161E071-16256
chr5121836302121837161E082-16256