rs4837223

Homo sapiens
C>T
None
Check p-value
SNV (Single Nucleotide Variation)
C==0276 (8252/29898,GnomAD)
C==0303 (8825/29118,TOPMED)
C==0419 (2099/5008,1000G)
C==0169 (651/3854,ALSPAC)
C==0154 (570/3708,TWINSUK)
chr9:128014128 (GRCh38.p7) (9q34.11)
AD
GWASdb2
1   publication(s)
See rs on genome
156 Enhancers around
20 Promoters around

Genomic Coordinates

Sequence Name Change(s)
GRCh38.p7 chr 9NC_000009.12:g.128014128C>T
GRCh37.p13 chr 9NC_000009.11:g.130776407C>T

Population Frequency

Study Population Group Sample # Ref Allele Alt Allele
1000GenomesAfricanSub1322C=0.461T=0.539
1000GenomesAmericanSub694C=0.210T=0.790
1000GenomesEast AsianSub1008C=0.692T=0.308
1000GenomesEuropeSub1006C=0.172T=0.828
1000GenomesGlobalStudy-wide5008C=0.419T=0.581
1000GenomesSouth AsianSub978C=0.480T=0.520
The Avon Longitudinal Study of Parents and ChildrenPARENT AND CHILD COHORTStudy-wide3854C=0.169T=0.831
The Genome Aggregation DatabaseAfricanSub8700C=0.446T=0.554
The Genome Aggregation DatabaseAmericanSub836C=0.260T=0.740
The Genome Aggregation DatabaseEast AsianSub1606C=0.668T=0.332
The Genome Aggregation DatabaseEuropeSub18454C=0.162T=0.837
The Genome Aggregation DatabaseGlobalStudy-wide29898C=0.276T=0.724
The Genome Aggregation DatabaseOtherSub302C=0.280T=0.720
Trans-Omics for Precision MedicineGlobalStudy-wide29118C=0.303T=0.696
UK 10K study - TwinsTWIN COHORTStudy-wide3708C=0.154T=0.846
PMID Title Author Journal
21314694Genomewide association analysis of symptoms of alcohol dependence in the molecular genetics of schizophrenia (MGS2) control sample.Kendler KSAlcohol Clin Exp Res

P-Value

SNP ID p-value Traits Study
rs48372230.000781alcohol dependence21314694

eQTL of rs4837223 in Brain tissues (GTEx Analysis Release V7)

Position (v37) eGene GeneID Variant p-value TSS Tissue
There is no eQTL annotation for this SNP

meQTL of rs4837223 in Fetal Brain

Probe ID Position Gene beta p-value
There is no meQTL annotation for this SNP

Genomic View

Chromatin Interaction

There is no significant Hi-C chromatin interaction data for this SNP.

Enhancer Annotation (GRCh37.p13)

Chromosome Start End Region Distance ( -/+ : Up/Downstream )
chr9130726653130726906E067-49501
chr9130726912130727056E067-49351
chr9130727422130728684E067-47723
chr9130728780130729331E067-47076
chr9130729339130729442E067-46965
chr9130729506130729633E067-46774
chr9130729679130729982E067-46425
chr9130730021130730223E067-46184
chr9130730334130730899E067-45508
chr9130730919130732494E067-43913
chr9130732616130736930E067-39477
chr9130737589130737648E067-38759
chr9130769499130769605E067-6802
chr9130797031130797300E06720624
chr9130797303130798080E06720896
chr9130817611130818769E06741204
chr9130819225130819396E06742818
chr9130819442130820348E06743035
chr9130726653130726906E068-49501
chr9130726912130727056E068-49351
chr9130727422130728684E068-47723
chr9130728780130729331E068-47076
chr9130729339130729442E068-46965
chr9130729506130729633E068-46774
chr9130729679130729982E068-46425
chr9130730021130730223E068-46184
chr9130730334130730899E068-45508
chr9130730919130732494E068-43913
chr9130763542130763739E068-12668
chr9130797031130797300E06820624
chr9130797303130798080E06820896
chr9130815875130816181E06839468
chr9130816352130816451E06839945
chr9130816512130816967E06840105
chr9130817178130817223E06840771
chr9130817611130818769E06841204
chr9130819225130819396E06842818
chr9130819442130820348E06843035
chr9130820443130820671E06844036
chr9130824005130824237E06847598
chr9130726653130726906E069-49501
chr9130726912130727056E069-49351
chr9130728780130729331E069-47076
chr9130729339130729442E069-46965
chr9130729506130729633E069-46774
chr9130729679130729982E069-46425
chr9130730021130730223E069-46184
chr9130730919130732494E069-43913
chr9130797031130797300E06920624
chr9130797303130798080E06920896
chr9130817611130818769E06941204
chr9130819225130819396E06942818
chr9130819442130820348E06943035
chr9130823260130823542E06946853
chr9130728780130729331E070-47076
chr9130729339130729442E070-46965
chr9130729506130729633E070-46774
chr9130729679130729982E070-46425
chr9130730021130730223E070-46184
chr9130730334130730899E070-45508
chr9130730919130732494E070-43913
chr9130732616130736930E070-39477
chr9130737589130737648E070-38759
chr9130737781130738334E070-38073
chr9130738376130738478E070-37929
chr9130726653130726906E071-49501
chr9130726912130727056E071-49351
chr9130728780130729331E071-47076
chr9130729339130729442E071-46965
chr9130729506130729633E071-46774
chr9130729679130729982E071-46425
chr9130730021130730223E071-46184
chr9130730334130730899E071-45508
chr9130769499130769605E071-6802
chr9130769635130770841E071-5566
chr9130797031130797300E07120624
chr9130797303130798080E07120896
chr9130816512130816967E07140105
chr9130817178130817223E07140771
chr9130817611130818769E07141204
chr9130819225130819396E07142818
chr9130819442130820348E07143035
chr9130820443130820671E07144036
chr9130726653130726906E072-49501
chr9130726912130727056E072-49351
chr9130727422130728684E072-47723
chr9130728780130729331E072-47076
chr9130729339130729442E072-46965
chr9130729506130729633E072-46774
chr9130729679130729982E072-46425
chr9130730021130730223E072-46184
chr9130730334130730899E072-45508
chr9130797031130797300E07220624
chr9130797303130798080E07220896
chr9130817611130818769E07241204
chr9130819225130819396E07242818
chr9130819442130820348E07243035
chr9130820443130820671E07244036
chr9130726653130726906E073-49501
chr9130726912130727056E073-49351
chr9130727422130728684E073-47723
chr9130728780130729331E073-47076
chr9130729339130729442E073-46965
chr9130729506130729633E073-46774
chr9130729679130729982E073-46425
chr9130730021130730223E073-46184
chr9130730334130730899E073-45508
chr9130732616130736930E073-39477
chr9130737589130737648E073-38759
chr9130752720130753928E073-22479
chr9130797031130797300E07320624
chr9130797303130798080E07320896
chr9130817611130818769E07341204
chr9130819225130819396E07342818
chr9130819442130820348E07343035
chr9130824005130824237E07347598
chr9130726653130726906E074-49501
chr9130726912130727056E074-49351
chr9130727422130728684E074-47723
chr9130728780130729331E074-47076
chr9130729339130729442E074-46965
chr9130729506130729633E074-46774
chr9130729679130729982E074-46425
chr9130730021130730223E074-46184
chr9130730334130730899E074-45508
chr9130730919130732494E074-43913
chr9130732616130736930E074-39477
chr9130769499130769605E074-6802
chr9130797031130797300E07420624
chr9130816352130816451E07439945
chr9130816512130816967E07440105
chr9130817178130817223E07440771
chr9130817611130818769E07441204
chr9130819225130819396E07442818
chr9130819442130820348E07443035
chr9130726912130727056E081-49351
chr9130727422130728684E081-47723
chr9130728780130729331E081-47076
chr9130729339130729442E081-46965
chr9130729506130729633E081-46774
chr9130729679130729982E081-46425
chr9130730919130732494E081-43913
chr9130732616130736930E081-39477
chr9130736937130737513E081-38894
chr9130737589130737648E081-38759
chr9130737781130738334E081-38073
chr9130738376130738478E081-37929
chr9130727422130728684E082-47723
chr9130728780130729331E082-47076
chr9130729339130729442E082-46965
chr9130730919130732494E082-43913
chr9130732616130736930E082-39477
chr9130736937130737513E082-38894
chr9130737589130737648E082-38759
chr9130737781130738334E082-38073
chr9130738376130738478E082-37929










Promoter Annotation (GRCh37.p13)

Chromosome Start End Region Distance(-/+:Up/Downstream)
chr9130740982130741055E067-35352
chr9130741251130744463E067-31944
chr9130740982130741055E068-35352
chr9130741251130744463E068-31944
chr9130740982130741055E069-35352
chr9130741251130744463E069-31944
chr9130740982130741055E070-35352
chr9130741251130744463E070-31944
chr9130740982130741055E071-35352
chr9130741251130744463E071-31944
chr9130740982130741055E072-35352
chr9130741251130744463E072-31944
chr9130740982130741055E073-35352
chr9130741251130744463E073-31944
chr9130740982130741055E074-35352
chr9130741251130744463E074-31944
chr9130740982130741055E081-35352
chr9130741251130744463E081-31944
chr9130740982130741055E082-35352
chr9130741251130744463E082-31944