SNP Detail Info-rs4837362

Organism: Homo sapiens

Alleles: A>C / A>T

Gene : Feature

None

p-value: Check p-value

Variation Type: SNV (Single Nucleotide Variation)

Frequency:

A==0200 (5951/29748,GnomAD)
A==0214 (6252/29118,TOPMED)
A==0221 (1105/5008,1000G)
A==0234 (902/3854,ALSPAC)
A==0248 (920/3708,TWINSUK)

Position: chr9:129400975 (GRCh38.p7) (9q34.11)

Phenotype: AD

Dataset:

GWASdb2

Publications: 1 publication(s)

Genomic View: See rs on genome

Enhancer: 12 Enhancers around

Promoter: 0 Promoter around

Study	Population	Group	Sample #	Ref Allele	Alt Allele
1000Genomes	African	Sub	1322	A=0.181	C=0.819
1000Genomes	American	Sub	694	A=0.230	C=0.770
1000Genomes	East Asian	Sub	1008	A=0.170	C=0.830
1000Genomes	Europe	Sub	1006	A=0.252	C=0.748
1000Genomes	Global	Study-wide	5008	A=0.221	C=0.779
1000Genomes	South Asian	Sub	978	A=0.290	C=0.710
The Avon Longitudinal Study of Parents and Children	PARENT AND CHILD COHORT	Study-wide	3854	A=0.234	C=0.766
The Genome Aggregation Database	African	Sub	8652	A=0.179	C=0.821
The Genome Aggregation Database	American	Sub	836	A=0.170	C=0.83,
The Genome Aggregation Database	East Asian	Sub	1610	A=0.168	C=0.832
The Genome Aggregation Database	Europe	Sub	18348	A=0.213	C=0.786
The Genome Aggregation Database	Global	Study-wide	29748	A=0.200	C=0.799
The Genome Aggregation Database	Other	Sub	302	A=0.270	C=0.73,
Trans-Omics for Precision Medicine	Global	Study-wide	29118	A=0.214	C=0.785
UK 10K study - Twins	TWIN COHORT	Study-wide	3708	A=0.248	C=0.752

PMID	Title	Author	Journal
24277619	ALDH2 is associated to alcohol dependence and is the major genetic determinant of "daily maximum drinks" in a GWAS study of an isolated rural Chinese sample.	Quillen EE	Am J Med Genet B Neuropsychiatr Genet

SNP ID	p-value	Traits	Study
rs4837362	0.00025	alcohol dependence	24277619

Position (v37)	eGene	GeneID	Variant	p-value	TSS	Tissue
There is no eQTL annotation for this SNP

Probe ID	Position	Gene	beta	p-value
There is no meQTL annotation for this SNP

Chromosome	Start	End	Region	Distance ( -/+ : Up/Downstream )
chr9	30333079	30333191	E067	20497
chr9	30333320	30333400	E067	20738
chr9	30360570	30360610	E067	47988
chr9	30360825	30360905	E067	48243
chr9	30333079	30333191	E069	20497
chr9	30333320	30333400	E069	20738
chr9	30332932	30333000	E071	20350
chr9	30333079	30333191	E071	20497
chr9	30332932	30333000	E072	20350
chr9	30333079	30333191	E072	20497
chr9	30360570	30360610	E074	47988
chr9	30360825	30360905	E074	48243

rs4837362