Sequence Name | Change(s) |
---|---|
GRCh38.p7 chr 8 | NC_000008.11:g.126466080G>A |
GRCh37.p13 chr 8 | NC_000008.10:g.127478325G>A |
Study | Population | Group | Sample # | Ref Allele | Alt Allele |
---|---|---|---|---|---|
1000Genomes | African | Sub | 1322 | G=0.539 | A=0.461 |
1000Genomes | American | Sub | 694 | G=0.310 | A=0.690 |
1000Genomes | East Asian | Sub | 1008 | G=0.293 | A=0.707 |
1000Genomes | Europe | Sub | 1006 | G=0.404 | A=0.596 |
1000Genomes | Global | Study-wide | 5008 | G=0.400 | A=0.600 |
1000Genomes | South Asian | Sub | 978 | G=0.390 | A=0.610 |
The Avon Longitudinal Study of Parents and Children | PARENT AND CHILD COHORT | Study-wide | 3854 | G=0.372 | A=0.628 |
The Genome Aggregation Database | African | Sub | 8706 | G=0.518 | A=0.482 |
The Genome Aggregation Database | American | Sub | 832 | G=0.280 | A=0.720 |
The Genome Aggregation Database | East Asian | Sub | 1606 | G=0.267 | A=0.733 |
The Genome Aggregation Database | Europe | Sub | 18464 | G=0.370 | A=0.629 |
The Genome Aggregation Database | Global | Study-wide | 29910 | G=0.404 | A=0.595 |
The Genome Aggregation Database | Other | Sub | 302 | G=0.320 | A=0.680 |
Trans-Omics for Precision Medicine | Global | Study-wide | 29118 | G=0.434 | A=0.565 |
UK 10K study - Twins | TWIN COHORT | Study-wide | 3708 | G=0.380 | A=0.620 |
PMID | Title | Author | Journal |
---|---|---|---|
19581569 | Genome-wide association study of alcohol dependence. | Treutlein J | Arch Gen Psychiatry |
SNP ID | p-value | Traits | Study |
---|---|---|---|
rs4870976 | 6.4E-05 | alcohol dependence | 19581569 |
Position (v37) | eGene | GeneID | Variant | p-value | TSS | Tissue | |
---|---|---|---|---|---|---|---|
There is no eQTL annotation for this SNP |
Probe ID | Position | Gene | beta | p-value | |||
---|---|---|---|---|---|---|---|
There is no meQTL annotation for this SNP |
There is no significant Hi-C chromatin interaction data for this SNP.
Chromosome | Start | End | Region | Distance ( -/+ : Up/Downstream ) |
---|---|---|---|---|
chr8 | 127509006 | 127509653 | E067 | 30681 |
chr8 | 127509673 | 127509768 | E067 | 31348 |
chr8 | 127509835 | 127510107 | E067 | 31510 |
chr8 | 127509006 | 127509653 | E068 | 30681 |
chr8 | 127509673 | 127509768 | E068 | 31348 |
chr8 | 127509835 | 127510107 | E068 | 31510 |
chr8 | 127504597 | 127504677 | E070 | 26272 |
chr8 | 127504792 | 127505095 | E070 | 26467 |
chr8 | 127505376 | 127505446 | E070 | 27051 |
chr8 | 127439084 | 127439295 | E071 | -39030 |
chr8 | 127439386 | 127439426 | E071 | -38899 |
chr8 | 127509006 | 127509653 | E071 | 30681 |
chr8 | 127509673 | 127509768 | E071 | 31348 |
chr8 | 127509835 | 127510107 | E071 | 31510 |
chr8 | 127510156 | 127510745 | E071 | 31831 |
chr8 | 127509006 | 127509653 | E072 | 30681 |
chr8 | 127509673 | 127509768 | E072 | 31348 |
chr8 | 127509835 | 127510107 | E072 | 31510 |
chr8 | 127500378 | 127500960 | E073 | 22053 |
chr8 | 127509673 | 127509768 | E073 | 31348 |
chr8 | 127509835 | 127510107 | E073 | 31510 |
chr8 | 127438724 | 127439077 | E074 | -39248 |
chr8 | 127439084 | 127439295 | E074 | -39030 |
chr8 | 127509006 | 127509653 | E074 | 30681 |
chr8 | 127509673 | 127509768 | E074 | 31348 |
chr8 | 127509835 | 127510107 | E074 | 31510 |
chr8 | 127510156 | 127510745 | E074 | 31831 |
chr8 | 127438039 | 127438706 | E081 | -39619 |
chr8 | 127438724 | 127439077 | E081 | -39248 |
chr8 | 127437070 | 127437772 | E082 | -40553 |
chr8 | 127438039 | 127438706 | E082 | -39619 |
chr8 | 127438724 | 127439077 | E082 | -39248 |