Sequence Name | Change(s) |
---|---|
GRCh38.p7 chr 11 | NC_000011.10:g.11268524G>A |
GRCh37.p13 chr 11 | NC_000011.9:g.11290071G>A |
Study | Population | Group | Sample # | Ref Allele | Alt Allele |
---|---|---|---|---|---|
1000Genomes | African | Sub | 1322 | G=0.318 | A=0.682 |
1000Genomes | American | Sub | 694 | G=0.330 | A=0.670 |
1000Genomes | East Asian | Sub | 1008 | G=0.303 | A=0.697 |
1000Genomes | Europe | Sub | 1006 | G=0.286 | A=0.714 |
1000Genomes | Global | Study-wide | 5008 | G=0.301 | A=0.699 |
1000Genomes | South Asian | Sub | 978 | G=0.270 | A=0.730 |
The Avon Longitudinal Study of Parents and Children | PARENT AND CHILD COHORT | Study-wide | 3854 | G=0.289 | A=0.711 |
The Genome Aggregation Database | African | Sub | 8692 | G=0.322 | A=0.678 |
The Genome Aggregation Database | American | Sub | 834 | G=0.320 | A=0.680 |
The Genome Aggregation Database | East Asian | Sub | 1612 | G=0.298 | A=0.702 |
The Genome Aggregation Database | Europe | Sub | 18440 | G=0.319 | A=0.680 |
The Genome Aggregation Database | Global | Study-wide | 29880 | G=0.318 | A=0.681 |
The Genome Aggregation Database | Other | Sub | 302 | G=0.250 | A=0.750 |
Trans-Omics for Precision Medicine | Global | Study-wide | 29118 | G=0.301 | A=0.698 |
UK 10K study - Twins | TWIN COHORT | Study-wide | 3708 | G=0.294 | A=0.706 |
PMID | Title | Author | Journal |
---|---|---|---|
20201924 | Genome-wide association study of alcohol dependence implicates a region on chromosome 11. | Edenberg HJ | Alcohol Clin Exp Res |
SNP ID | p-value | Traits | Study |
---|---|---|---|
rs4910291 | 0.000801 | alcohol dependence | 20201924 |
Position (v37) | eGene | GeneID | Variant | p-value | TSS | Tissue | |
---|---|---|---|---|---|---|---|
There is no eQTL annotation for this SNP |
Probe ID | Position | Gene | beta | p-value | |||
---|---|---|---|---|---|---|---|
There is no meQTL annotation for this SNP |
There is no significant Hi-C chromatin interaction data for this SNP.
Chromosome | Start | End | Region | Distance ( -/+ : Up/Downstream ) |
---|---|---|---|---|
chr11 | 11257892 | 11257974 | E067 | -32097 |
chr11 | 11258013 | 11258948 | E067 | -31123 |
chr11 | 11285274 | 11285490 | E067 | -4581 |
chr11 | 11285650 | 11285700 | E067 | -4371 |
chr11 | 11306618 | 11306700 | E067 | 16547 |
chr11 | 11307092 | 11307206 | E067 | 17021 |
chr11 | 11334997 | 11335346 | E067 | 44926 |
chr11 | 11257892 | 11257974 | E068 | -32097 |
chr11 | 11264519 | 11266607 | E068 | -23464 |
chr11 | 11284747 | 11284836 | E068 | -5235 |
chr11 | 11284943 | 11285015 | E068 | -5056 |
chr11 | 11285017 | 11285170 | E068 | -4901 |
chr11 | 11285274 | 11285490 | E068 | -4581 |
chr11 | 11285650 | 11285700 | E068 | -4371 |
chr11 | 11306618 | 11306700 | E068 | 16547 |
chr11 | 11307092 | 11307206 | E068 | 17021 |
chr11 | 11307319 | 11307617 | E068 | 17248 |
chr11 | 11311155 | 11311205 | E068 | 21084 |
chr11 | 11311388 | 11311442 | E068 | 21317 |
chr11 | 11334997 | 11335346 | E068 | 44926 |
chr11 | 11335470 | 11335888 | E068 | 45399 |
chr11 | 11240513 | 11240600 | E069 | -49471 |
chr11 | 11264519 | 11266607 | E069 | -23464 |
chr11 | 11285274 | 11285490 | E069 | -4581 |
chr11 | 11306618 | 11306700 | E069 | 16547 |
chr11 | 11307092 | 11307206 | E069 | 17021 |
chr11 | 11307319 | 11307617 | E069 | 17248 |
chr11 | 11334997 | 11335346 | E069 | 44926 |
chr11 | 11335470 | 11335888 | E069 | 45399 |
chr11 | 11335936 | 11336132 | E069 | 45865 |
chr11 | 11336275 | 11336360 | E069 | 46204 |
chr11 | 11336396 | 11336460 | E069 | 46325 |
chr11 | 11317833 | 11317883 | E070 | 27762 |
chr11 | 11318026 | 11318450 | E070 | 27955 |
chr11 | 11318458 | 11318576 | E070 | 28387 |
chr11 | 11318856 | 11318915 | E070 | 28785 |
chr11 | 11257664 | 11257772 | E071 | -32299 |
chr11 | 11257892 | 11257974 | E071 | -32097 |
chr11 | 11258013 | 11258948 | E071 | -31123 |
chr11 | 11264373 | 11264433 | E071 | -25638 |
chr11 | 11264519 | 11266607 | E071 | -23464 |
chr11 | 11285274 | 11285490 | E071 | -4581 |
chr11 | 11286905 | 11287890 | E071 | -2181 |
chr11 | 11287908 | 11287990 | E071 | -2081 |
chr11 | 11307092 | 11307206 | E071 | 17021 |
chr11 | 11307319 | 11307617 | E071 | 17248 |
chr11 | 11307619 | 11307699 | E071 | 17548 |
chr11 | 11310902 | 11311002 | E071 | 20831 |
chr11 | 11311155 | 11311205 | E071 | 21084 |
chr11 | 11311388 | 11311442 | E071 | 21317 |
chr11 | 11334390 | 11334516 | E071 | 44319 |
chr11 | 11334997 | 11335346 | E071 | 44926 |
chr11 | 11335470 | 11335888 | E071 | 45399 |
chr11 | 11335936 | 11336132 | E071 | 45865 |
chr11 | 11240513 | 11240600 | E072 | -49471 |
chr11 | 11257664 | 11257772 | E072 | -32299 |
chr11 | 11257892 | 11257974 | E072 | -32097 |
chr11 | 11264519 | 11266607 | E072 | -23464 |
chr11 | 11284747 | 11284836 | E072 | -5235 |
chr11 | 11284943 | 11285015 | E072 | -5056 |
chr11 | 11306618 | 11306700 | E072 | 16547 |
chr11 | 11307092 | 11307206 | E072 | 17021 |
chr11 | 11307319 | 11307617 | E072 | 17248 |
chr11 | 11335470 | 11335888 | E072 | 45399 |
chr11 | 11284747 | 11284836 | E073 | -5235 |
chr11 | 11284943 | 11285015 | E073 | -5056 |
chr11 | 11285017 | 11285170 | E073 | -4901 |
chr11 | 11302341 | 11302391 | E073 | 12270 |
chr11 | 11302408 | 11302458 | E073 | 12337 |
chr11 | 11302521 | 11302607 | E073 | 12450 |
chr11 | 11302609 | 11302772 | E073 | 12538 |
chr11 | 11307092 | 11307206 | E073 | 17021 |
chr11 | 11307319 | 11307617 | E073 | 17248 |
chr11 | 11308286 | 11308336 | E073 | 18215 |
chr11 | 11311155 | 11311205 | E073 | 21084 |
chr11 | 11311388 | 11311442 | E073 | 21317 |
chr11 | 11334997 | 11335346 | E073 | 44926 |
chr11 | 11335470 | 11335888 | E073 | 45399 |
chr11 | 11335936 | 11336132 | E073 | 45865 |
chr11 | 11336275 | 11336360 | E073 | 46204 |
chr11 | 11336396 | 11336460 | E073 | 46325 |
chr11 | 11240513 | 11240600 | E074 | -49471 |
chr11 | 11240646 | 11240730 | E074 | -49341 |
chr11 | 11240823 | 11240873 | E074 | -49198 |
chr11 | 11257664 | 11257772 | E074 | -32299 |
chr11 | 11257892 | 11257974 | E074 | -32097 |
chr11 | 11264519 | 11266607 | E074 | -23464 |
chr11 | 11305951 | 11306016 | E074 | 15880 |
chr11 | 11306054 | 11306129 | E074 | 15983 |
chr11 | 11306158 | 11306362 | E074 | 16087 |
chr11 | 11306486 | 11306588 | E074 | 16415 |
chr11 | 11306618 | 11306700 | E074 | 16547 |
chr11 | 11307092 | 11307206 | E074 | 17021 |
chr11 | 11307319 | 11307617 | E074 | 17248 |
chr11 | 11307619 | 11307699 | E074 | 17548 |
chr11 | 11335470 | 11335888 | E074 | 45399 |
chr11 | 11335936 | 11336132 | E074 | 45865 |
chr11 | 11336275 | 11336360 | E074 | 46204 |
chr11 | 11256035 | 11256252 | E081 | -33819 |
chr11 | 11256282 | 11256341 | E081 | -33730 |
chr11 | 11256395 | 11256471 | E081 | -33600 |
chr11 | 11256527 | 11256587 | E081 | -33484 |
chr11 | 11264519 | 11266607 | E081 | -23464 |
chr11 | 11256035 | 11256252 | E082 | -33819 |
chr11 | 11256282 | 11256341 | E082 | -33730 |
chr11 | 11256395 | 11256471 | E082 | -33600 |
chr11 | 11256527 | 11256587 | E082 | -33484 |