| Sequence Name | Change(s) |
|---|---|
| GRCh38.p7 chr 11 | NC_000011.10:g.116268402G>A |
| GRCh37.p13 chr 11 | NC_000011.9:g.116139119G>A |
| Study | Population | Group | Sample # | Ref Allele | Alt Allele |
|---|---|---|---|---|---|
| 1000Genomes | African | Sub | 1322 | G=0.467 | A=0.533 |
| 1000Genomes | American | Sub | 694 | G=0.500 | A=0.500 |
| 1000Genomes | East Asian | Sub | 1008 | G=0.480 | A=0.520 |
| 1000Genomes | Europe | Sub | 1006 | G=0.408 | A=0.592 |
| 1000Genomes | Global | Study-wide | 5008 | G=0.434 | A=0.566 |
| 1000Genomes | South Asian | Sub | 978 | G=0.320 | A=0.680 |
| The Avon Longitudinal Study of Parents and Children | PARENT AND CHILD COHORT | Study-wide | 3854 | G=0.421 | A=0.579 |
| Trans-Omics for Precision Medicine | Global | Study-wide | 29118 | G=0.441 | A=0.558 |
| UK 10K study - Twins | TWIN COHORT | Study-wide | 3708 | G=0.420 | A=0.580 |
| PMID | Title | Author | Journal |
|---|---|---|---|
| 20201924 | Genome-wide association study of alcohol dependence implicates a region on chromosome 11. | Edenberg HJ | Alcohol Clin Exp Res |
| SNP ID | p-value | Traits | Study |
|---|---|---|---|
| rs4938246 | 0.00011 | alcohol dependence(early age of onset) | 20201924 |
| rs4938246 | 0.00073 | alcohol dependence | 20201924 |
| Position (v37) | eGene | GeneID | Variant | p-value | TSS | Tissue | |
|---|---|---|---|---|---|---|---|
| There is no eQTL annotation for this SNP | |||||||
| Probe ID | Position | Gene | beta | p-value | |||
|---|---|---|---|---|---|---|---|
| There is no meQTL annotation for this SNP | |||||||
There is no significant Hi-C chromatin interaction data for this SNP.
| Chromosome | Start | End | Region | Distance ( -/+ : Up/Downstream ) |
|---|---|---|---|---|
| chr11 | 116089825 | 116089984 | E067 | -49135 |
| chr11 | 116095592 | 116095644 | E067 | -43475 |
| chr11 | 116095694 | 116095765 | E067 | -43354 |
| chr11 | 116095804 | 116096349 | E067 | -42770 |
| chr11 | 116183205 | 116183255 | E067 | 44086 |
| chr11 | 116183383 | 116183691 | E067 | 44264 |
| chr11 | 116183702 | 116184233 | E067 | 44583 |
| chr11 | 116184255 | 116184342 | E067 | 45136 |
| chr11 | 116184543 | 116184776 | E067 | 45424 |
| chr11 | 116095592 | 116095644 | E068 | -43475 |
| chr11 | 116095694 | 116095765 | E068 | -43354 |
| chr11 | 116099906 | 116101440 | E068 | -37679 |
| chr11 | 116127862 | 116128078 | E068 | -11041 |
| chr11 | 116133891 | 116134128 | E068 | -4991 |
| chr11 | 116182335 | 116182416 | E068 | 43216 |
| chr11 | 116182500 | 116182550 | E068 | 43381 |
| chr11 | 116182716 | 116182789 | E068 | 43597 |
| chr11 | 116182830 | 116182880 | E068 | 43711 |
| chr11 | 116182903 | 116182953 | E068 | 43784 |
| chr11 | 116183205 | 116183255 | E068 | 44086 |
| chr11 | 116183383 | 116183691 | E068 | 44264 |
| chr11 | 116184255 | 116184342 | E068 | 45136 |
| chr11 | 116184543 | 116184776 | E068 | 45424 |
| chr11 | 116089720 | 116089802 | E069 | -49317 |
| chr11 | 116089825 | 116089984 | E069 | -49135 |
| chr11 | 116090062 | 116090437 | E069 | -48682 |
| chr11 | 116095189 | 116095526 | E069 | -43593 |
| chr11 | 116095592 | 116095644 | E069 | -43475 |
| chr11 | 116095694 | 116095765 | E069 | -43354 |
| chr11 | 116146992 | 116148073 | E069 | 7873 |
| chr11 | 116182335 | 116182416 | E069 | 43216 |
| chr11 | 116182500 | 116182550 | E069 | 43381 |
| chr11 | 116183205 | 116183255 | E069 | 44086 |
| chr11 | 116183383 | 116183691 | E069 | 44264 |
| chr11 | 116183702 | 116184233 | E069 | 44583 |
| chr11 | 116184255 | 116184342 | E069 | 45136 |
| chr11 | 116184543 | 116184776 | E069 | 45424 |
| chr11 | 116184852 | 116184988 | E069 | 45733 |
| chr11 | 116090062 | 116090437 | E070 | -48682 |
| chr11 | 116090459 | 116090536 | E070 | -48583 |
| chr11 | 116094790 | 116094855 | E070 | -44264 |
| chr11 | 116095037 | 116095119 | E070 | -44000 |
| chr11 | 116095189 | 116095526 | E070 | -43593 |
| chr11 | 116095592 | 116095644 | E070 | -43475 |
| chr11 | 116095694 | 116095765 | E070 | -43354 |
| chr11 | 116095804 | 116096349 | E070 | -42770 |
| chr11 | 116096354 | 116096463 | E070 | -42656 |
| chr11 | 116096588 | 116096789 | E070 | -42330 |
| chr11 | 116099356 | 116099477 | E070 | -39642 |
| chr11 | 116099519 | 116099573 | E070 | -39546 |
| chr11 | 116099906 | 116101440 | E070 | -37679 |
| chr11 | 116101508 | 116101564 | E070 | -37555 |
| chr11 | 116101588 | 116101684 | E070 | -37435 |
| chr11 | 116101846 | 116101933 | E070 | -37186 |
| chr11 | 116102142 | 116102668 | E070 | -36451 |
| chr11 | 116102787 | 116102841 | E070 | -36278 |
| chr11 | 116103046 | 116103101 | E070 | -36018 |
| chr11 | 116103133 | 116103547 | E070 | -35572 |
| chr11 | 116103566 | 116103710 | E070 | -35409 |
| chr11 | 116103799 | 116103986 | E070 | -35133 |
| chr11 | 116104186 | 116104374 | E070 | -34745 |
| chr11 | 116104419 | 116104679 | E070 | -34440 |
| chr11 | 116113708 | 116113782 | E070 | -25337 |
| chr11 | 116113863 | 116113913 | E070 | -25206 |
| chr11 | 116113940 | 116113990 | E070 | -25129 |
| chr11 | 116114823 | 116114863 | E070 | -24256 |
| chr11 | 116114872 | 116114984 | E070 | -24135 |
| chr11 | 116114994 | 116115094 | E070 | -24025 |
| chr11 | 116115422 | 116115658 | E070 | -23461 |
| chr11 | 116115669 | 116115940 | E070 | -23179 |
| chr11 | 116120645 | 116120695 | E070 | -18424 |
| chr11 | 116133279 | 116133345 | E070 | -5774 |
| chr11 | 116133426 | 116133511 | E070 | -5608 |
| chr11 | 116133516 | 116133566 | E070 | -5553 |
| chr11 | 116133891 | 116134128 | E070 | -4991 |
| chr11 | 116134195 | 116134902 | E070 | -4217 |
| chr11 | 116134996 | 116135069 | E070 | -4050 |
| chr11 | 116136393 | 116136443 | E070 | -2676 |
| chr11 | 116136598 | 116136687 | E070 | -2432 |
| chr11 | 116136712 | 116136759 | E070 | -2360 |
| chr11 | 116137006 | 116137218 | E070 | -1901 |
| chr11 | 116137366 | 116137446 | E070 | -1673 |
| chr11 | 116137818 | 116137899 | E070 | -1220 |
| chr11 | 116138000 | 116138126 | E070 | -993 |
| chr11 | 116143100 | 116143199 | E070 | 3981 |
| chr11 | 116144276 | 116144347 | E070 | 5157 |
| chr11 | 116144512 | 116144570 | E070 | 5393 |
| chr11 | 116144870 | 116144920 | E070 | 5751 |
| chr11 | 116145010 | 116145973 | E070 | 5891 |
| chr11 | 116146041 | 116146091 | E070 | 6922 |
| chr11 | 116146122 | 116146179 | E070 | 7003 |
| chr11 | 116146455 | 116146643 | E070 | 7336 |
| chr11 | 116146827 | 116146990 | E070 | 7708 |
| chr11 | 116146992 | 116148073 | E070 | 7873 |
| chr11 | 116148123 | 116148187 | E070 | 9004 |
| chr11 | 116149494 | 116149683 | E070 | 10375 |
| chr11 | 116149740 | 116149823 | E070 | 10621 |
| chr11 | 116150195 | 116150728 | E070 | 11076 |
| chr11 | 116150970 | 116151021 | E070 | 11851 |
| chr11 | 116155376 | 116155466 | E070 | 16257 |
| chr11 | 116155756 | 116156105 | E070 | 16637 |
| chr11 | 116156163 | 116156293 | E070 | 17044 |
| chr11 | 116171030 | 116171074 | E070 | 31911 |
| chr11 | 116171148 | 116171273 | E070 | 32029 |
| chr11 | 116171617 | 116171667 | E070 | 32498 |
| chr11 | 116180926 | 116181248 | E070 | 41807 |
| chr11 | 116181557 | 116181703 | E070 | 42438 |
| chr11 | 116181979 | 116182285 | E070 | 42860 |
| chr11 | 116182335 | 116182416 | E070 | 43216 |
| chr11 | 116182500 | 116182550 | E070 | 43381 |
| chr11 | 116182716 | 116182789 | E070 | 43597 |
| chr11 | 116182830 | 116182880 | E070 | 43711 |
| chr11 | 116182903 | 116182953 | E070 | 43784 |
| chr11 | 116183205 | 116183255 | E070 | 44086 |
| chr11 | 116184543 | 116184776 | E070 | 45424 |
| chr11 | 116184852 | 116184988 | E070 | 45733 |
| chr11 | 116185644 | 116185694 | E070 | 46525 |
| chr11 | 116185695 | 116185744 | E070 | 46576 |
| chr11 | 116095037 | 116095119 | E071 | -44000 |
| chr11 | 116095189 | 116095526 | E071 | -43593 |
| chr11 | 116095592 | 116095644 | E071 | -43475 |
| chr11 | 116095694 | 116095765 | E071 | -43354 |
| chr11 | 116095804 | 116096349 | E071 | -42770 |
| chr11 | 116182716 | 116182789 | E071 | 43597 |
| chr11 | 116182830 | 116182880 | E071 | 43711 |
| chr11 | 116182903 | 116182953 | E071 | 43784 |
| chr11 | 116183205 | 116183255 | E071 | 44086 |
| chr11 | 116184543 | 116184776 | E071 | 45424 |
| chr11 | 116184852 | 116184988 | E071 | 45733 |
| chr11 | 116095592 | 116095644 | E072 | -43475 |
| chr11 | 116095694 | 116095765 | E072 | -43354 |
| chr11 | 116095804 | 116096349 | E072 | -42770 |
| chr11 | 116133891 | 116134128 | E072 | -4991 |
| chr11 | 116184255 | 116184342 | E072 | 45136 |
| chr11 | 116089720 | 116089802 | E073 | -49317 |
| chr11 | 116089825 | 116089984 | E073 | -49135 |
| chr11 | 116090062 | 116090437 | E073 | -48682 |
| chr11 | 116090459 | 116090536 | E073 | -48583 |
| chr11 | 116094656 | 116094732 | E073 | -44387 |
| chr11 | 116094790 | 116094855 | E073 | -44264 |
| chr11 | 116095189 | 116095526 | E073 | -43593 |
| chr11 | 116095592 | 116095644 | E073 | -43475 |
| chr11 | 116095694 | 116095765 | E073 | -43354 |
| chr11 | 116136712 | 116136759 | E073 | -2360 |
| chr11 | 116146827 | 116146990 | E073 | 7708 |
| chr11 | 116146992 | 116148073 | E073 | 7873 |
| chr11 | 116183205 | 116183255 | E073 | 44086 |
| chr11 | 116183383 | 116183691 | E073 | 44264 |
| chr11 | 116183205 | 116183255 | E074 | 44086 |
| chr11 | 116184543 | 116184776 | E074 | 45424 |
| chr11 | 116090062 | 116090437 | E081 | -48682 |
| chr11 | 116090459 | 116090536 | E081 | -48583 |
| chr11 | 116095189 | 116095526 | E081 | -43593 |
| chr11 | 116095592 | 116095644 | E081 | -43475 |
| chr11 | 116095694 | 116095765 | E081 | -43354 |
| chr11 | 116095804 | 116096349 | E081 | -42770 |
| chr11 | 116096354 | 116096463 | E081 | -42656 |
| chr11 | 116096588 | 116096789 | E081 | -42330 |
| chr11 | 116099906 | 116101440 | E081 | -37679 |
| chr11 | 116101508 | 116101564 | E081 | -37555 |
| chr11 | 116101588 | 116101684 | E081 | -37435 |
| chr11 | 116101846 | 116101933 | E081 | -37186 |
| chr11 | 116120645 | 116120695 | E081 | -18424 |
| chr11 | 116133426 | 116133511 | E081 | -5608 |
| chr11 | 116133516 | 116133566 | E081 | -5553 |
| chr11 | 116133891 | 116134128 | E081 | -4991 |
| chr11 | 116134195 | 116134902 | E081 | -4217 |
| chr11 | 116134996 | 116135069 | E081 | -4050 |
| chr11 | 116141106 | 116141156 | E081 | 1987 |
| chr11 | 116141462 | 116141717 | E081 | 2343 |
| chr11 | 116141981 | 116142083 | E081 | 2862 |
| chr11 | 116142476 | 116142516 | E081 | 3357 |
| chr11 | 116143100 | 116143199 | E081 | 3981 |
| chr11 | 116144276 | 116144347 | E081 | 5157 |
| chr11 | 116144512 | 116144570 | E081 | 5393 |
| chr11 | 116144870 | 116144920 | E081 | 5751 |
| chr11 | 116145010 | 116145973 | E081 | 5891 |
| chr11 | 116146041 | 116146091 | E081 | 6922 |
| chr11 | 116146122 | 116146179 | E081 | 7003 |
| chr11 | 116146455 | 116146643 | E081 | 7336 |
| chr11 | 116146827 | 116146990 | E081 | 7708 |
| chr11 | 116146992 | 116148073 | E081 | 7873 |
| chr11 | 116149494 | 116149683 | E081 | 10375 |
| chr11 | 116149740 | 116149823 | E081 | 10621 |
| chr11 | 116150195 | 116150728 | E081 | 11076 |
| chr11 | 116150970 | 116151021 | E081 | 11851 |
| chr11 | 116155376 | 116155466 | E081 | 16257 |
| chr11 | 116155756 | 116156105 | E081 | 16637 |
| chr11 | 116156163 | 116156293 | E081 | 17044 |
| chr11 | 116156915 | 116156965 | E081 | 17796 |
| chr11 | 116158328 | 116158609 | E081 | 19209 |
| chr11 | 116158700 | 116158867 | E081 | 19581 |
| chr11 | 116172408 | 116172503 | E081 | 33289 |
| chr11 | 116173358 | 116173443 | E081 | 34239 |
| chr11 | 116173500 | 116174072 | E081 | 34381 |
| chr11 | 116181557 | 116181703 | E081 | 42438 |
| chr11 | 116181979 | 116182285 | E081 | 42860 |
| chr11 | 116182335 | 116182416 | E081 | 43216 |
| chr11 | 116182500 | 116182550 | E081 | 43381 |
| chr11 | 116182716 | 116182789 | E081 | 43597 |
| chr11 | 116182830 | 116182880 | E081 | 43711 |
| chr11 | 116182903 | 116182953 | E081 | 43784 |
| chr11 | 116183205 | 116183255 | E081 | 44086 |
| chr11 | 116183383 | 116183691 | E081 | 44264 |
| chr11 | 116183702 | 116184233 | E081 | 44583 |
| chr11 | 116184255 | 116184342 | E081 | 45136 |
| chr11 | 116184543 | 116184776 | E081 | 45424 |
| chr11 | 116090062 | 116090437 | E082 | -48682 |
| chr11 | 116090459 | 116090536 | E082 | -48583 |
| chr11 | 116095189 | 116095526 | E082 | -43593 |
| chr11 | 116095592 | 116095644 | E082 | -43475 |
| chr11 | 116095694 | 116095765 | E082 | -43354 |
| chr11 | 116095804 | 116096349 | E082 | -42770 |
| chr11 | 116096354 | 116096463 | E082 | -42656 |
| chr11 | 116096588 | 116096789 | E082 | -42330 |
| chr11 | 116099906 | 116101440 | E082 | -37679 |
| chr11 | 116101508 | 116101564 | E082 | -37555 |
| chr11 | 116101588 | 116101684 | E082 | -37435 |
| chr11 | 116133891 | 116134128 | E082 | -4991 |
| chr11 | 116134195 | 116134902 | E082 | -4217 |
| chr11 | 116136598 | 116136687 | E082 | -2432 |
| chr11 | 116136712 | 116136759 | E082 | -2360 |
| chr11 | 116137006 | 116137218 | E082 | -1901 |
| chr11 | 116137366 | 116137446 | E082 | -1673 |
| chr11 | 116144512 | 116144570 | E082 | 5393 |
| chr11 | 116144870 | 116144920 | E082 | 5751 |
| chr11 | 116145010 | 116145973 | E082 | 5891 |
| chr11 | 116146041 | 116146091 | E082 | 6922 |
| chr11 | 116146122 | 116146179 | E082 | 7003 |
| chr11 | 116155756 | 116156105 | E082 | 16637 |
| chr11 | 116156163 | 116156293 | E082 | 17044 |
| chr11 | 116156915 | 116156965 | E082 | 17796 |
| chr11 | 116173358 | 116173443 | E082 | 34239 |
| chr11 | 116173500 | 116174072 | E082 | 34381 |
| chr11 | 116183205 | 116183255 | E082 | 44086 |
| chr11 | 116183383 | 116183691 | E082 | 44264 |
| chr11 | 116183702 | 116184233 | E082 | 44583 |
| chr11 | 116184255 | 116184342 | E082 | 45136 |