SNP Detail Info-rs510550

Organism: Homo sapiens

Alleles: A>G

Gene : Feature

None

p-value: Check p-value

Variation Type: SNV (Single Nucleotide Variation)

Frequency:

A==0119 (3550/29688,GnomAD)
A==0104 (3029/29118,TOPMED)
A==0064 (323/5008,1000G)
A==0180 (693/3854,ALSPAC)
A==0176 (654/3708,TWINSUK)

Position: chr10:81368229 (GRCh38.p7) (10q23.1)

Phenotype: AD

Dataset:

GWASdb2

Publications: 1 publication(s)

Genomic View: See rs on genome

Enhancer: 0 Enhancer around

Promoter: 0 Promoter around

Sequence Name	Change(s)
GRCh38.p7 chr 10	NC_000010.11:g.81368229A>G
GRCh37.p13 chr 10	NC_000010.10:g.83127985A>G

Study	Population	Group	Sample #	Ref Allele	Alt Allele
1000Genomes	African	Sub	1322	A=0.023	G=0.977
1000Genomes	American	Sub	694	A=0.080	G=0.920
1000Genomes	East Asian	Sub	1008	A=0.034	G=0.966
1000Genomes	Europe	Sub	1006	A=0.147	G=0.853
1000Genomes	Global	Study-wide	5008	A=0.064	G=0.936
1000Genomes	South Asian	Sub	978	A=0.060	G=0.940
The Avon Longitudinal Study of Parents and Children	PARENT AND CHILD COHORT	Study-wide	3854	A=0.180	G=0.820
The Genome Aggregation Database	African	Sub	8710	A=0.050	G=0.950
The Genome Aggregation Database	American	Sub	816	A=0.100	G=0.900
The Genome Aggregation Database	East Asian	Sub	1584	A=0.059	G=0.941
The Genome Aggregation Database	Europe	Sub	18276	A=0.158	G=0.841
The Genome Aggregation Database	Global	Study-wide	29688	A=0.119	G=0.880
The Genome Aggregation Database	Other	Sub	302	A=0.140	G=0.860
Trans-Omics for Precision Medicine	Global	Study-wide	29118	A=0.104	G=0.896
UK 10K study - Twins	TWIN COHORT	Study-wide	3708	A=0.176	G=0.824

PMID	Title	Author	Journal
23743675	A meta-analysis of two genome-wide association studies to identify novel loci for maximum number of alcoholic drinks.	Kapoor M	Hum Genet

SNP ID	p-value	Traits	Study
rs510550	3.48E-05	alcohol consumption	23743675

Position (v37)	eGene	GeneID	Variant	p-value	TSS	Tissue
There is no eQTL annotation for this SNP

Probe ID	Position	Gene	beta	p-value
There is no meQTL annotation for this SNP

rs510550