rs584274

Homo sapiens
C>G
None
Check p-value
SNV (Single Nucleotide Variation)
G=0075 (2243/29918,GnomAD)
G=0115 (3375/29118,TOPMED)
G=0080 (403/5008,1000G)
G=0001 (3/3854,ALSPAC)
G=0001 (2/3708,TWINSUK)
chr6:62464512 (GRCh38.p7) (6q11.1)
AD
GWASdb2
1   publication(s)
See rs on genome
0 Enhancer around
0 Promoter around

Genomic Coordinates

Sequence Name Change(s)
GRCh38.p7 chr 6NC_000006.12:g.62464512C>G
GRCh37.p13 chr 6NC_000006.11:g.63174417C>G

Population Frequency

Study Population Group Sample # Ref Allele Alt Allele
1000GenomesAfricanSub1322C=0.707G=0.293
1000GenomesAmericanSub694C=0.980G=0.020
1000GenomesEast AsianSub1008C=1.000G=0.000
1000GenomesEuropeSub1006C=0.999G=0.001
1000GenomesGlobalStudy-wide5008C=0.920G=0.080
1000GenomesSouth AsianSub978C=1.000G=0.000
The Avon Longitudinal Study of Parents and ChildrenPARENT AND CHILD COHORTStudy-wide3854C=0.999G=0.001
The Genome Aggregation DatabaseAfricanSub8706C=0.746G=0.254
The Genome Aggregation DatabaseAmericanSub836C=0.980G=0.020
The Genome Aggregation DatabaseEast AsianSub1616C=1.000G=0.000
The Genome Aggregation DatabaseEuropeSub18458C=0.999G=0.000
The Genome Aggregation DatabaseGlobalStudy-wide29918C=0.925G=0.075
The Genome Aggregation DatabaseOtherSub302C=1.000G=0.000
Trans-Omics for Precision MedicineGlobalStudy-wide29118C=0.884G=0.115
UK 10K study - TwinsTWIN COHORTStudy-wide3708C=0.999G=0.001
PMID Title Author Journal

P-Value

SNP ID p-value Traits Study
rs5842742.26E-10alcohol consumptionpha001398

eQTL of rs584274 in Brain tissues (GTEx Analysis Release V7)

Position (v37) eGene GeneID Variant p-value TSS Tissue
There is no eQTL annotation for this SNP

meQTL of rs584274 in Fetal Brain

Probe ID Position Gene beta p-value
There is no meQTL annotation for this SNP

Genomic View

Chromatin Interaction

There is no significant Hi-C chromatin interaction data for this SNP.