SNP Detail Info-rs5927282

Organism: Homo sapiens

Alleles: C>T

Gene : Feature

None

p-value: Check p-value

Variation Type: SNV (Single Nucleotide Variation)

Frequency:

C==0374 (7469/19956,GnomAD)
C==0204 (769/3775,1000G)
C==0489 (1815/3708,TWINSUK)
C==0470 (1357/2889,ALSPAC)

Position: chrX:34501959 (GRCh38.p7) (Xp21.1)

Phenotype: ND

Dataset:

GWASdb2

Publications: 1 publication(s)

Genomic View: See rs on genome

Enhancer: 0 Enhancer around

Promoter: 0 Promoter around

Sequence Name	Change(s)
GRCh38.p7 chr X	NC_000023.11:g.34501959C>T
GRCh37.p13 chr X	NC_000023.10:g.34520076C>T

Study	Population	Group	Sample #	Ref Allele	Alt Allele
1000Genomes	African	Sub	1003	C=0.137	T=0.863
1000Genomes	American	Sub	524	C=0.280	T=0.720
1000Genomes	East Asian	Sub	764	C=0.000	T=1.000
1000Genomes	Europe	Sub	766	C=0.540	T=0.460
1000Genomes	Global	Study-wide	3775	C=0.204	T=0.796
1000Genomes	South Asian	Sub	718	C=0.100	T=0.900
The Avon Longitudinal Study of Parents and Children	PARENT AND CHILD COHORT	Study-wide	2889	C=0.470	T=0.530
The Genome Aggregation Database	African	Sub	5618	C=0.169	T=0.831
The Genome Aggregation Database	American	Sub	586	C=0.290	T=0.710
The Genome Aggregation Database	East Asian	Sub	1014	C=0.002	T=0.998
The Genome Aggregation Database	Europe	Sub	12563	C=0.498	T=0.501
The Genome Aggregation Database	Global	Study-wide	19956	C=0.374	T=0.625
The Genome Aggregation Database	Other	Sub	175	C=0.450	T=0.550
UK 10K study - Twins	TWIN COHORT	Study-wide	3708	C=0.489	T=0.511

rs5927282