Sequence Name | Change(s) |
---|---|
GRCh38.p7 chr 11 | NC_000011.10:g.20334811delA |
GRCh38.p7 chr 11 | NC_000011.10:g.20334811dup |
GRCh38.p7 chr 11 | NC_000011.10:g.20334810_20334811dup |
GRCh37.p13 chr 11 | NC_000011.9:g.20356357delA |
GRCh37.p13 chr 11 | NC_000011.9:g.20356357dup |
GRCh37.p13 chr 11 | NC_000011.9:g.20356356_20356357dup |
Study | Population | Group | Sample # | Ref Allele | Alt Allele |
---|---|---|---|---|---|
1000Genomes | African | Sub | 1322 | (A)13=0.628 | dupA=0.372 |
1000Genomes | American | Sub | 694 | (A)13=0.410 | dupA=0.590 |
1000Genomes | East Asian | Sub | 1008 | (A)13=0.403 | dupA=0.597 |
1000Genomes | Europe | Sub | 1006 | (A)13=0.377 | dupA=0.623 |
1000Genomes | Global | Study-wide | 5008 | (A)13=0.433 | dupA=0.567 |
1000Genomes | South Asian | Sub | 978 | (A)13=0.280 | dupA=0.720 |
PMID | Title | Author | Journal |
---|---|---|---|
29460428 | Genomewide Association Study of Alcohol Dependence and Related Traits in a Thai Population. | Gelernter J | Alcohol Clin Exp Res |
SNP ID | p-value | Traits | Study |
---|---|---|---|
rs59730814 | 1E-07 | alcohol dependence | 29460428 |
Position (v37) | eGene | GeneID | Variant | p-value | TSS | Tissue | |
---|---|---|---|---|---|---|---|
There is no eQTL annotation for this SNP |
Probe ID | Position | Gene | beta | p-value | |||
---|---|---|---|---|---|---|---|
There is no meQTL annotation for this SNP |
There is no significant Hi-C chromatin interaction data for this SNP.
Chromosome | Start | End | Region | Distance ( -/+ : Up/Downstream ) |
---|---|---|---|---|
chr11 | 17372345 | 17372458 | E067 | -42732 |
chr11 | 17372464 | 17372651 | E067 | -42539 |
chr11 | 17404681 | 17406204 | E067 | -8986 |
chr11 | 17406357 | 17406416 | E067 | -8774 |
chr11 | 17406484 | 17406609 | E067 | -8581 |
chr11 | 17406689 | 17406739 | E067 | -8451 |
chr11 | 17406925 | 17407462 | E067 | -7728 |
chr11 | 17407463 | 17407673 | E067 | -7517 |
chr11 | 17407889 | 17408724 | E067 | -6466 |
chr11 | 17427944 | 17428114 | E067 | 12754 |
chr11 | 17428137 | 17428226 | E067 | 12947 |
chr11 | 17428259 | 17428309 | E067 | 13069 |
chr11 | 17434426 | 17434543 | E067 | 19236 |
chr11 | 17434586 | 17434740 | E067 | 19396 |
chr11 | 17444074 | 17444114 | E067 | 28884 |
chr11 | 17452166 | 17452217 | E067 | 36976 |
chr11 | 17452400 | 17452454 | E067 | 37210 |
chr11 | 17452616 | 17452697 | E067 | 37426 |
chr11 | 17452709 | 17452810 | E067 | 37519 |
chr11 | 17452844 | 17452958 | E067 | 37654 |
chr11 | 17452984 | 17453078 | E067 | 37794 |
chr11 | 17453226 | 17453470 | E067 | 38036 |
chr11 | 17453546 | 17453664 | E067 | 38356 |
chr11 | 17453768 | 17453886 | E067 | 38578 |
chr11 | 17454135 | 17454199 | E067 | 38945 |
chr11 | 17404681 | 17406204 | E068 | -8986 |
chr11 | 17426856 | 17426983 | E068 | 11666 |
chr11 | 17427050 | 17427883 | E068 | 11860 |
chr11 | 17427944 | 17428114 | E068 | 12754 |
chr11 | 17428137 | 17428226 | E068 | 12947 |
chr11 | 17428259 | 17428309 | E068 | 13069 |
chr11 | 17428537 | 17428595 | E068 | 13347 |
chr11 | 17444074 | 17444114 | E068 | 28884 |
chr11 | 17446038 | 17446143 | E068 | 30848 |
chr11 | 17446230 | 17446280 | E068 | 31040 |
chr11 | 17446572 | 17446647 | E068 | 31382 |
chr11 | 17452709 | 17452810 | E068 | 37519 |
chr11 | 17452844 | 17452958 | E068 | 37654 |
chr11 | 17452984 | 17453078 | E068 | 37794 |
chr11 | 17407463 | 17407673 | E069 | -7517 |
chr11 | 17407889 | 17408724 | E069 | -6466 |
chr11 | 17427944 | 17428114 | E069 | 12754 |
chr11 | 17428137 | 17428226 | E069 | 12947 |
chr11 | 17434586 | 17434740 | E069 | 19396 |
chr11 | 17452166 | 17452217 | E069 | 36976 |
chr11 | 17452400 | 17452454 | E069 | 37210 |
chr11 | 17372464 | 17372651 | E071 | -42539 |
chr11 | 17426856 | 17426983 | E071 | 11666 |
chr11 | 17427050 | 17427883 | E071 | 11860 |
chr11 | 17427944 | 17428114 | E071 | 12754 |
chr11 | 17428137 | 17428226 | E071 | 12947 |
chr11 | 17428259 | 17428309 | E071 | 13069 |
chr11 | 17434586 | 17434740 | E071 | 19396 |
chr11 | 17379981 | 17380054 | E072 | -35136 |
chr11 | 17404681 | 17406204 | E072 | -8986 |
chr11 | 17406357 | 17406416 | E072 | -8774 |
chr11 | 17406484 | 17406609 | E072 | -8581 |
chr11 | 17406689 | 17406739 | E072 | -8451 |
chr11 | 17406925 | 17407462 | E072 | -7728 |
chr11 | 17427050 | 17427883 | E072 | 11860 |
chr11 | 17427944 | 17428114 | E072 | 12754 |
chr11 | 17428137 | 17428226 | E072 | 12947 |
chr11 | 17428259 | 17428309 | E072 | 13069 |
chr11 | 17434164 | 17434242 | E072 | 18974 |
chr11 | 17434426 | 17434543 | E072 | 19236 |
chr11 | 17434586 | 17434740 | E072 | 19396 |
chr11 | 17434811 | 17435046 | E072 | 19621 |
chr11 | 17452616 | 17452697 | E072 | 37426 |
chr11 | 17453546 | 17453664 | E072 | 38356 |
chr11 | 17453768 | 17453886 | E072 | 38578 |
chr11 | 17455773 | 17456019 | E072 | 40583 |
chr11 | 17378212 | 17378320 | E073 | -36870 |
chr11 | 17378364 | 17378446 | E073 | -36744 |
chr11 | 17404681 | 17406204 | E073 | -8986 |
chr11 | 17406357 | 17406416 | E073 | -8774 |
chr11 | 17406484 | 17406609 | E073 | -8581 |
chr11 | 17406689 | 17406739 | E073 | -8451 |
chr11 | 17406925 | 17407462 | E073 | -7728 |
chr11 | 17427944 | 17428114 | E073 | 12754 |
chr11 | 17450251 | 17450301 | E073 | 35061 |
chr11 | 17450677 | 17450717 | E073 | 35487 |
chr11 | 17451328 | 17451420 | E073 | 36138 |
chr11 | 17451968 | 17452034 | E073 | 36778 |
chr11 | 17452166 | 17452217 | E073 | 36976 |
chr11 | 17452400 | 17452454 | E073 | 37210 |
chr11 | 17452616 | 17452697 | E073 | 37426 |
chr11 | 17452709 | 17452810 | E073 | 37519 |
chr11 | 17452844 | 17452958 | E073 | 37654 |
chr11 | 17452984 | 17453078 | E073 | 37794 |
chr11 | 17453226 | 17453470 | E073 | 38036 |
chr11 | 17453546 | 17453664 | E073 | 38356 |
chr11 | 17453768 | 17453886 | E073 | 38578 |
chr11 | 17454135 | 17454199 | E073 | 38945 |
chr11 | 17426856 | 17426983 | E074 | 11666 |
chr11 | 17427050 | 17427883 | E074 | 11860 |
chr11 | 17427944 | 17428114 | E074 | 12754 |
chr11 | 17428137 | 17428226 | E074 | 12947 |
chr11 | 17428259 | 17428309 | E074 | 13069 |
chr11 | 17402265 | 17402378 | E081 | -12812 |
chr11 | 17402409 | 17402716 | E081 | -12474 |
chr11 | 17402794 | 17402998 | E081 | -12192 |
chr11 | 17406357 | 17406416 | E081 | -8774 |
chr11 | 17406484 | 17406609 | E081 | -8581 |
chr11 | 17406689 | 17406739 | E081 | -8451 |
chr11 | 17406925 | 17407462 | E081 | -7728 |
chr11 | 17407463 | 17407673 | E081 | -7517 |
chr11 | 17407889 | 17408724 | E081 | -6466 |
chr11 | 17408908 | 17409009 | E081 | -6181 |
chr11 | 17409079 | 17409147 | E081 | -6043 |
chr11 | 17409189 | 17409340 | E081 | -5850 |
chr11 | 17436262 | 17436341 | E081 | 21072 |
chr11 | 17436700 | 17436750 | E081 | 21510 |
chr11 | 17436933 | 17436973 | E081 | 21743 |
chr11 | 17437185 | 17437245 | E081 | 21995 |
chr11 | 17437299 | 17437633 | E081 | 22109 |
chr11 | 17438125 | 17438224 | E081 | 22935 |
chr11 | 17438337 | 17438387 | E081 | 23147 |
chr11 | 17438416 | 17438466 | E081 | 23226 |
chr11 | 17438606 | 17438676 | E081 | 23416 |
chr11 | 17452709 | 17452810 | E081 | 37519 |
chr11 | 17452844 | 17452958 | E081 | 37654 |
chr11 | 17452984 | 17453078 | E081 | 37794 |
chr11 | 17453226 | 17453470 | E081 | 38036 |
chr11 | 17453546 | 17453664 | E081 | 38356 |
chr11 | 17453768 | 17453886 | E081 | 38578 |
chr11 | 17454135 | 17454199 | E081 | 38945 |
chr11 | 17454378 | 17454445 | E081 | 39188 |
chr11 | 17454455 | 17454505 | E081 | 39265 |
chr11 | 17455773 | 17456019 | E081 | 40583 |
chr11 | 17456118 | 17456208 | E081 | 40928 |
chr11 | 17456301 | 17456374 | E081 | 41111 |
chr11 | 17456386 | 17456551 | E081 | 41196 |
chr11 | 17456697 | 17456832 | E081 | 41507 |
chr11 | 17453546 | 17453664 | E082 | 38356 |
chr11 | 17453768 | 17453886 | E082 | 38578 |
chr11 | 17455773 | 17456019 | E082 | 40583 |
chr11 | 17456118 | 17456208 | E082 | 40928 |
Chromosome | Start | End | Region | Distance(-/+:Up/Downstream) |
---|---|---|---|---|
chr11 | 17372765 | 17373809 | E067 | -41381 |
chr11 | 17373924 | 17376614 | E067 | -38576 |
chr11 | 17410183 | 17411843 | E067 | -3347 |
chr11 | 17372765 | 17373809 | E068 | -41381 |
chr11 | 17373924 | 17376614 | E068 | -38576 |
chr11 | 17376622 | 17376765 | E068 | -38425 |
chr11 | 17410183 | 17411843 | E068 | -3347 |
chr11 | 17372765 | 17373809 | E069 | -41381 |
chr11 | 17373924 | 17376614 | E069 | -38576 |
chr11 | 17410183 | 17411843 | E069 | -3347 |
chr11 | 17372765 | 17373809 | E070 | -41381 |
chr11 | 17373924 | 17376614 | E070 | -38576 |
chr11 | 17410183 | 17411843 | E070 | -3347 |
chr11 | 17372765 | 17373809 | E071 | -41381 |
chr11 | 17373924 | 17376614 | E071 | -38576 |
chr11 | 17410183 | 17411843 | E071 | -3347 |
chr11 | 17372765 | 17373809 | E072 | -41381 |
chr11 | 17373924 | 17376614 | E072 | -38576 |
chr11 | 17410183 | 17411843 | E072 | -3347 |
chr11 | 17372765 | 17373809 | E073 | -41381 |
chr11 | 17373924 | 17376614 | E073 | -38576 |
chr11 | 17410183 | 17411843 | E073 | -3347 |
chr11 | 17372765 | 17373809 | E074 | -41381 |
chr11 | 17373924 | 17376614 | E074 | -38576 |
chr11 | 17410183 | 17411843 | E074 | -3347 |
chr11 | 17373924 | 17376614 | E081 | -38576 |
chr11 | 17372765 | 17373809 | E082 | -41381 |
chr11 | 17373924 | 17376614 | E082 | -38576 |
chr11 | 17410183 | 17411843 | E082 | -3347 |