Sequence Name | Change(s) |
---|---|
GRCh38.p7 chr 1 | NC_000001.11:g.228969398A>G |
GRCh37.p13 chr 1 | NC_000001.10:g.229105145A>G |
Study | Population | Group | Sample # | Ref Allele | Alt Allele |
---|---|---|---|---|---|
1000Genomes | African | Sub | 1322 | A=0.441 | G=0.559 |
1000Genomes | American | Sub | 694 | A=0.370 | G=0.630 |
1000Genomes | East Asian | Sub | 1008 | A=0.610 | G=0.390 |
1000Genomes | Europe | Sub | 1006 | A=0.322 | G=0.678 |
1000Genomes | Global | Study-wide | 5008 | A=0.441 | G=0.559 |
1000Genomes | South Asian | Sub | 978 | A=0.440 | G=0.560 |
The Avon Longitudinal Study of Parents and Children | PARENT AND CHILD COHORT | Study-wide | 3854 | A=0.299 | G=0.701 |
The Genome Aggregation Database | African | Sub | 8678 | A=0.411 | G=0.589 |
The Genome Aggregation Database | American | Sub | 838 | A=0.370 | G=0.630 |
The Genome Aggregation Database | East Asian | Sub | 1612 | A=0.606 | G=0.394 |
The Genome Aggregation Database | Europe | Sub | 18422 | A=0.314 | G=0.685 |
The Genome Aggregation Database | Global | Study-wide | 29852 | A=0.359 | G=0.640 |
The Genome Aggregation Database | Other | Sub | 302 | A=0.340 | G=0.660 |
Trans-Omics for Precision Medicine | Global | Study-wide | 29116 | A=0.349 | G=0.650 |
UK 10K study - Twins | TWIN COHORT | Study-wide | 3708 | A=0.295 | G=0.705 |
SNP ID | p-value | Traits | Study |
---|---|---|---|
rs603404 | 0.000078 | alcohol dependence(early age of onset) | 20201924 |
rs603404 | 0.0000784 | alcoholism | pha002892 |
rs603404 | 0.00009 | alcohol dependence | 20201924 |
rs603404 | 0.0000902 | alcoholism | pha002893 |
Position (v37) | eGene | GeneID | Variant | p-value | TSS | Tissue | |
---|---|---|---|---|---|---|---|
There is no eQTL annotation for this SNP |
Probe ID | Position | Gene | beta | p-value | |||
---|---|---|---|---|---|---|---|
There is no meQTL annotation for this SNP |
Chromosome | Start | End | Region | Distance ( -/+ : Up/Downstream ) |
---|---|---|---|---|
chr1 | 229073180 | 229073301 | E067 | -31844 |
chr1 | 229073434 | 229074693 | E067 | -30452 |
chr1 | 229076598 | 229076664 | E067 | -28481 |
chr1 | 229076849 | 229076957 | E067 | -28188 |
chr1 | 229077068 | 229077151 | E067 | -27994 |
chr1 | 229077553 | 229077675 | E067 | -27470 |
chr1 | 229080156 | 229080372 | E067 | -24773 |
chr1 | 229080594 | 229081026 | E067 | -24119 |
chr1 | 229088281 | 229088475 | E067 | -16670 |
chr1 | 229089058 | 229089250 | E067 | -15895 |
chr1 | 229089309 | 229089412 | E067 | -15733 |
chr1 | 229114250 | 229114938 | E067 | 9105 |
chr1 | 229115050 | 229115104 | E067 | 9905 |
chr1 | 229122094 | 229122305 | E067 | 16949 |
chr1 | 229122431 | 229122556 | E067 | 17286 |
chr1 | 229122838 | 229122888 | E067 | 17693 |
chr1 | 229123037 | 229123090 | E067 | 17892 |
chr1 | 229123158 | 229123423 | E067 | 18013 |
chr1 | 229124482 | 229124825 | E067 | 19337 |
chr1 | 229125168 | 229125332 | E067 | 20023 |
chr1 | 229125343 | 229125444 | E067 | 20198 |
chr1 | 229125538 | 229125582 | E067 | 20393 |
chr1 | 229125680 | 229126730 | E067 | 20535 |
chr1 | 229127075 | 229127244 | E067 | 21930 |
chr1 | 229137767 | 229138008 | E067 | 32622 |
chr1 | 229138442 | 229138508 | E067 | 33297 |
chr1 | 229139030 | 229139480 | E067 | 33885 |
chr1 | 229139553 | 229139776 | E067 | 34408 |
chr1 | 229139824 | 229140005 | E067 | 34679 |
chr1 | 229140059 | 229140239 | E067 | 34914 |
chr1 | 229073180 | 229073301 | E068 | -31844 |
chr1 | 229073434 | 229074693 | E068 | -30452 |
chr1 | 229076598 | 229076664 | E068 | -28481 |
chr1 | 229080594 | 229081026 | E068 | -24119 |
chr1 | 229088281 | 229088475 | E068 | -16670 |
chr1 | 229089058 | 229089250 | E068 | -15895 |
chr1 | 229089309 | 229089412 | E068 | -15733 |
chr1 | 229114250 | 229114938 | E068 | 9105 |
chr1 | 229115050 | 229115104 | E068 | 9905 |
chr1 | 229122094 | 229122305 | E068 | 16949 |
chr1 | 229122431 | 229122556 | E068 | 17286 |
chr1 | 229124482 | 229124825 | E068 | 19337 |
chr1 | 229125168 | 229125332 | E068 | 20023 |
chr1 | 229125343 | 229125444 | E068 | 20198 |
chr1 | 229125538 | 229125582 | E068 | 20393 |
chr1 | 229125680 | 229126730 | E068 | 20535 |
chr1 | 229128222 | 229128321 | E068 | 23077 |
chr1 | 229137348 | 229137620 | E068 | 32203 |
chr1 | 229137767 | 229138008 | E068 | 32622 |
chr1 | 229138442 | 229138508 | E068 | 33297 |
chr1 | 229139030 | 229139480 | E068 | 33885 |
chr1 | 229139553 | 229139776 | E068 | 34408 |
chr1 | 229139824 | 229140005 | E068 | 34679 |
chr1 | 229140059 | 229140239 | E068 | 34914 |
chr1 | 229141120 | 229141201 | E068 | 35975 |
chr1 | 229141369 | 229141439 | E068 | 36224 |
chr1 | 229142034 | 229142109 | E068 | 36889 |
chr1 | 229073180 | 229073301 | E069 | -31844 |
chr1 | 229073434 | 229074693 | E069 | -30452 |
chr1 | 229074822 | 229074932 | E069 | -30213 |
chr1 | 229076598 | 229076664 | E069 | -28481 |
chr1 | 229076849 | 229076957 | E069 | -28188 |
chr1 | 229077068 | 229077151 | E069 | -27994 |
chr1 | 229080594 | 229081026 | E069 | -24119 |
chr1 | 229088281 | 229088475 | E069 | -16670 |
chr1 | 229089058 | 229089250 | E069 | -15895 |
chr1 | 229114250 | 229114938 | E069 | 9105 |
chr1 | 229115050 | 229115104 | E069 | 9905 |
chr1 | 229119538 | 229119617 | E069 | 14393 |
chr1 | 229122094 | 229122305 | E069 | 16949 |
chr1 | 229122431 | 229122556 | E069 | 17286 |
chr1 | 229122838 | 229122888 | E069 | 17693 |
chr1 | 229123037 | 229123090 | E069 | 17892 |
chr1 | 229123158 | 229123423 | E069 | 18013 |
chr1 | 229123736 | 229123786 | E069 | 18591 |
chr1 | 229124482 | 229124825 | E069 | 19337 |
chr1 | 229125168 | 229125332 | E069 | 20023 |
chr1 | 229125343 | 229125444 | E069 | 20198 |
chr1 | 229125538 | 229125582 | E069 | 20393 |
chr1 | 229125680 | 229126730 | E069 | 20535 |
chr1 | 229127075 | 229127244 | E069 | 21930 |
chr1 | 229128222 | 229128321 | E069 | 23077 |
chr1 | 229128691 | 229129277 | E069 | 23546 |
chr1 | 229134140 | 229134227 | E069 | 28995 |
chr1 | 229138442 | 229138508 | E069 | 33297 |
chr1 | 229139030 | 229139480 | E069 | 33885 |
chr1 | 229139553 | 229139776 | E069 | 34408 |
chr1 | 229139824 | 229140005 | E069 | 34679 |
chr1 | 229140059 | 229140239 | E069 | 34914 |
chr1 | 229141120 | 229141201 | E069 | 35975 |
chr1 | 229141369 | 229141439 | E069 | 36224 |
chr1 | 229122431 | 229122556 | E070 | 17286 |
chr1 | 229122838 | 229122888 | E070 | 17693 |
chr1 | 229123037 | 229123090 | E070 | 17892 |
chr1 | 229123158 | 229123423 | E070 | 18013 |
chr1 | 229123736 | 229123786 | E070 | 18591 |
chr1 | 229124108 | 229124225 | E070 | 18963 |
chr1 | 229139030 | 229139480 | E070 | 33885 |
chr1 | 229139553 | 229139776 | E070 | 34408 |
chr1 | 229071815 | 229072229 | E071 | -32916 |
chr1 | 229072380 | 229072441 | E071 | -32704 |
chr1 | 229072452 | 229072511 | E071 | -32634 |
chr1 | 229073180 | 229073301 | E071 | -31844 |
chr1 | 229073434 | 229074693 | E071 | -30452 |
chr1 | 229075840 | 229075969 | E071 | -29176 |
chr1 | 229076598 | 229076664 | E071 | -28481 |
chr1 | 229076849 | 229076957 | E071 | -28188 |
chr1 | 229077068 | 229077151 | E071 | -27994 |
chr1 | 229080156 | 229080372 | E071 | -24773 |
chr1 | 229080594 | 229081026 | E071 | -24119 |
chr1 | 229089058 | 229089250 | E071 | -15895 |
chr1 | 229104590 | 229105074 | E071 | -71 |
chr1 | 229105140 | 229105292 | E071 | 0 |
chr1 | 229114250 | 229114938 | E071 | 9105 |
chr1 | 229115050 | 229115104 | E071 | 9905 |
chr1 | 229115228 | 229115417 | E071 | 10083 |
chr1 | 229115486 | 229115536 | E071 | 10341 |
chr1 | 229122094 | 229122305 | E071 | 16949 |
chr1 | 229122431 | 229122556 | E071 | 17286 |
chr1 | 229122838 | 229122888 | E071 | 17693 |
chr1 | 229123037 | 229123090 | E071 | 17892 |
chr1 | 229123158 | 229123423 | E071 | 18013 |
chr1 | 229123736 | 229123786 | E071 | 18591 |
chr1 | 229124108 | 229124225 | E071 | 18963 |
chr1 | 229124482 | 229124825 | E071 | 19337 |
chr1 | 229125168 | 229125332 | E071 | 20023 |
chr1 | 229125343 | 229125444 | E071 | 20198 |
chr1 | 229125538 | 229125582 | E071 | 20393 |
chr1 | 229125680 | 229126730 | E071 | 20535 |
chr1 | 229127075 | 229127244 | E071 | 21930 |
chr1 | 229128222 | 229128321 | E071 | 23077 |
chr1 | 229128691 | 229129277 | E071 | 23546 |
chr1 | 229134140 | 229134227 | E071 | 28995 |
chr1 | 229137055 | 229137242 | E071 | 31910 |
chr1 | 229137348 | 229137620 | E071 | 32203 |
chr1 | 229137767 | 229138008 | E071 | 32622 |
chr1 | 229138442 | 229138508 | E071 | 33297 |
chr1 | 229139030 | 229139480 | E071 | 33885 |
chr1 | 229139553 | 229139776 | E071 | 34408 |
chr1 | 229139824 | 229140005 | E071 | 34679 |
chr1 | 229140059 | 229140239 | E071 | 34914 |
chr1 | 229141120 | 229141201 | E071 | 35975 |
chr1 | 229141369 | 229141439 | E071 | 36224 |
chr1 | 229142034 | 229142109 | E071 | 36889 |
chr1 | 229142343 | 229142479 | E071 | 37198 |
chr1 | 229073180 | 229073301 | E072 | -31844 |
chr1 | 229073434 | 229074693 | E072 | -30452 |
chr1 | 229076598 | 229076664 | E072 | -28481 |
chr1 | 229076849 | 229076957 | E072 | -28188 |
chr1 | 229077068 | 229077151 | E072 | -27994 |
chr1 | 229079590 | 229079787 | E072 | -25358 |
chr1 | 229080156 | 229080372 | E072 | -24773 |
chr1 | 229080594 | 229081026 | E072 | -24119 |
chr1 | 229088281 | 229088475 | E072 | -16670 |
chr1 | 229089058 | 229089250 | E072 | -15895 |
chr1 | 229114250 | 229114938 | E072 | 9105 |
chr1 | 229115050 | 229115104 | E072 | 9905 |
chr1 | 229115228 | 229115417 | E072 | 10083 |
chr1 | 229115486 | 229115536 | E072 | 10341 |
chr1 | 229122094 | 229122305 | E072 | 16949 |
chr1 | 229122431 | 229122556 | E072 | 17286 |
chr1 | 229122838 | 229122888 | E072 | 17693 |
chr1 | 229123037 | 229123090 | E072 | 17892 |
chr1 | 229123158 | 229123423 | E072 | 18013 |
chr1 | 229123736 | 229123786 | E072 | 18591 |
chr1 | 229124482 | 229124825 | E072 | 19337 |
chr1 | 229125168 | 229125332 | E072 | 20023 |
chr1 | 229125343 | 229125444 | E072 | 20198 |
chr1 | 229125538 | 229125582 | E072 | 20393 |
chr1 | 229125680 | 229126730 | E072 | 20535 |
chr1 | 229128222 | 229128321 | E072 | 23077 |
chr1 | 229138442 | 229138508 | E072 | 33297 |
chr1 | 229139030 | 229139480 | E072 | 33885 |
chr1 | 229139553 | 229139776 | E072 | 34408 |
chr1 | 229139824 | 229140005 | E072 | 34679 |
chr1 | 229140059 | 229140239 | E072 | 34914 |
chr1 | 229141120 | 229141201 | E072 | 35975 |
chr1 | 229151415 | 229151926 | E072 | 46270 |
chr1 | 229073180 | 229073301 | E073 | -31844 |
chr1 | 229073434 | 229074693 | E073 | -30452 |
chr1 | 229076849 | 229076957 | E073 | -28188 |
chr1 | 229077068 | 229077151 | E073 | -27994 |
chr1 | 229105140 | 229105292 | E073 | 0 |
chr1 | 229114250 | 229114938 | E073 | 9105 |
chr1 | 229115050 | 229115104 | E073 | 9905 |
chr1 | 229122094 | 229122305 | E073 | 16949 |
chr1 | 229122431 | 229122556 | E073 | 17286 |
chr1 | 229122838 | 229122888 | E073 | 17693 |
chr1 | 229123037 | 229123090 | E073 | 17892 |
chr1 | 229123158 | 229123423 | E073 | 18013 |
chr1 | 229123736 | 229123786 | E073 | 18591 |
chr1 | 229124482 | 229124825 | E073 | 19337 |
chr1 | 229125168 | 229125332 | E073 | 20023 |
chr1 | 229125343 | 229125444 | E073 | 20198 |
chr1 | 229125538 | 229125582 | E073 | 20393 |
chr1 | 229125680 | 229126730 | E073 | 20535 |
chr1 | 229139553 | 229139776 | E073 | 34408 |
chr1 | 229139824 | 229140005 | E073 | 34679 |
chr1 | 229140059 | 229140239 | E073 | 34914 |
chr1 | 229141120 | 229141201 | E073 | 35975 |
chr1 | 229141369 | 229141439 | E073 | 36224 |
chr1 | 229071815 | 229072229 | E074 | -32916 |
chr1 | 229072380 | 229072441 | E074 | -32704 |
chr1 | 229072452 | 229072511 | E074 | -32634 |
chr1 | 229073180 | 229073301 | E074 | -31844 |
chr1 | 229073434 | 229074693 | E074 | -30452 |
chr1 | 229074822 | 229074932 | E074 | -30213 |
chr1 | 229076598 | 229076664 | E074 | -28481 |
chr1 | 229076849 | 229076957 | E074 | -28188 |
chr1 | 229077068 | 229077151 | E074 | -27994 |
chr1 | 229079485 | 229079545 | E074 | -25600 |
chr1 | 229079590 | 229079787 | E074 | -25358 |
chr1 | 229080156 | 229080372 | E074 | -24773 |
chr1 | 229080594 | 229081026 | E074 | -24119 |
chr1 | 229088281 | 229088475 | E074 | -16670 |
chr1 | 229089058 | 229089250 | E074 | -15895 |
chr1 | 229089309 | 229089412 | E074 | -15733 |
chr1 | 229114250 | 229114938 | E074 | 9105 |
chr1 | 229122094 | 229122305 | E074 | 16949 |
chr1 | 229122431 | 229122556 | E074 | 17286 |
chr1 | 229122838 | 229122888 | E074 | 17693 |
chr1 | 229123037 | 229123090 | E074 | 17892 |
chr1 | 229123158 | 229123423 | E074 | 18013 |
chr1 | 229123736 | 229123786 | E074 | 18591 |
chr1 | 229124108 | 229124225 | E074 | 18963 |
chr1 | 229124482 | 229124825 | E074 | 19337 |
chr1 | 229125168 | 229125332 | E074 | 20023 |
chr1 | 229125343 | 229125444 | E074 | 20198 |
chr1 | 229125538 | 229125582 | E074 | 20393 |
chr1 | 229125680 | 229126730 | E074 | 20535 |
chr1 | 229127075 | 229127244 | E074 | 21930 |
chr1 | 229128222 | 229128321 | E074 | 23077 |
chr1 | 229128691 | 229129277 | E074 | 23546 |
chr1 | 229134140 | 229134227 | E074 | 28995 |
chr1 | 229137055 | 229137242 | E074 | 31910 |
chr1 | 229137348 | 229137620 | E074 | 32203 |
chr1 | 229137767 | 229138008 | E074 | 32622 |
chr1 | 229138442 | 229138508 | E074 | 33297 |
chr1 | 229139030 | 229139480 | E074 | 33885 |
chr1 | 229139553 | 229139776 | E074 | 34408 |
chr1 | 229141120 | 229141201 | E074 | 35975 |
chr1 | 229141369 | 229141439 | E074 | 36224 |
chr1 | 229063260 | 229063607 | E081 | -41538 |
chr1 | 229063665 | 229064283 | E081 | -40862 |
chr1 | 229122094 | 229122305 | E081 | 16949 |
chr1 | 229122431 | 229122556 | E081 | 17286 |
chr1 | 229122838 | 229122888 | E081 | 17693 |
chr1 | 229123037 | 229123090 | E081 | 17892 |
chr1 | 229123158 | 229123423 | E081 | 18013 |
chr1 | 229123736 | 229123786 | E081 | 18591 |
chr1 | 229124108 | 229124225 | E081 | 18963 |
chr1 | 229124482 | 229124825 | E081 | 19337 |
chr1 | 229125680 | 229126730 | E081 | 20535 |
chr1 | 229127075 | 229127244 | E081 | 21930 |
chr1 | 229128222 | 229128321 | E081 | 23077 |
chr1 | 229128691 | 229129277 | E081 | 23546 |
chr1 | 229135625 | 229135821 | E081 | 30480 |
chr1 | 229139030 | 229139480 | E081 | 33885 |
chr1 | 229139553 | 229139776 | E081 | 34408 |
chr1 | 229139824 | 229140005 | E081 | 34679 |
chr1 | 229140059 | 229140239 | E081 | 34914 |
chr1 | 229141369 | 229141439 | E081 | 36224 |
chr1 | 229114135 | 229114190 | E082 | 8990 |
chr1 | 229119538 | 229119617 | E082 | 14393 |
chr1 | 229122094 | 229122305 | E082 | 16949 |
chr1 | 229122431 | 229122556 | E082 | 17286 |
chr1 | 229122838 | 229122888 | E082 | 17693 |
chr1 | 229123037 | 229123090 | E082 | 17892 |
chr1 | 229123158 | 229123423 | E082 | 18013 |
chr1 | 229123736 | 229123786 | E082 | 18591 |
chr1 | 229125680 | 229126730 | E082 | 20535 |
chr1 | 229128222 | 229128321 | E082 | 23077 |
chr1 | 229134868 | 229134964 | E082 | 29723 |
chr1 | 229134970 | 229135072 | E082 | 29825 |
chr1 | 229135142 | 229135615 | E082 | 29997 |
chr1 | 229135625 | 229135821 | E082 | 30480 |