rs61101261

Homo sapiens
C>A
None
Check p-value
SNV (Single Nucleotide Variation)
A=0044 (1284/29118,TOPMED)
A=0077 (1868/24048,GnomAD)
A=0108 (539/5008,1000G)
A=0060 (231/3854,ALSPAC)
A=0047 (175/3708,TWINSUK)
chr8:100793827 (GRCh38.p7) (8q22.3)
AD
GWASdb2
1   publication(s)
See rs on genome
20 Enhancers around
0 Promoter around

Genomic Coordinates

Sequence Name Change(s)
GRCh38.p7 chr 8NC_000008.11:g.100793827C>A
GRCh37.p13 chr 8NC_000008.10:g.101806055C>A

Population Frequency

Study Population Group Sample # Ref Allele Alt Allele
1000GenomesAfricanSub1322C=0.995A=0.005
1000GenomesAmericanSub694C=0.830A=0.170
1000GenomesEast AsianSub1008C=0.710A=0.290
1000GenomesEuropeSub1006C=0.949A=0.051
1000GenomesGlobalStudy-wide5008C=0.892A=0.108
1000GenomesSouth AsianSub978C=0.930A=0.070
The Avon Longitudinal Study of Parents and ChildrenPARENT AND CHILD COHORTStudy-wide3854C=0.940A=0.060
The Genome Aggregation DatabaseAfricanSub6036C=0.977A=0.023
The Genome Aggregation DatabaseAmericanSub764C=0.790A=0.210
The Genome Aggregation DatabaseEast AsianSub1428C=0.646A=0.354
The Genome Aggregation DatabaseEuropeSub15560C=0.932A=0.067
The Genome Aggregation DatabaseGlobalStudy-wide24048C=0.922A=0.077
The Genome Aggregation DatabaseOtherSub260C=0.940A=0.060
Trans-Omics for Precision MedicineGlobalStudy-wide29118C=0.955A=0.044
UK 10K study - TwinsTWIN COHORTStudy-wide3708C=0.953A=0.047
PMID Title Author Journal
23743675A meta-analysis of two genome-wide association studies to identify novel loci for maximum number of alcoholic drinks.Kapoor MHum Genet

P-Value

SNP ID p-value Traits Study
rs611012612.1E-05alcohol consumption23743675

eQTL of rs61101261 in Brain tissues (GTEx Analysis Release V7)

Position (v37) eGene GeneID Variant p-value TSS Tissue
There is no eQTL annotation for this SNP

meQTL of rs61101261 in Fetal Brain

Probe ID Position Gene beta p-value
There is no meQTL annotation for this SNP

Genomic View

Chromatin Interaction

There is no significant Hi-C chromatin interaction data for this SNP.

Enhancer Annotation (GRCh37.p13)

Chromosome Start End Region Distance ( -/+ : Up/Downstream )
chr8101773554101775046E068-31009
chr8101847470101848214E06841415
chr8101762717101763214E071-42841
chr8101764400101764498E071-41557
chr8101764560101764751E071-41304
chr8101764770101764823E071-41232
chr8101803597101803661E072-2394
chr8101803758101804338E074-1717
chr8101804391101804510E074-1545
chr8101847470101848214E07441415
chr8101848259101848339E07442204
chr8101775773101775823E081-30232
chr8101775832101775882E081-30173
chr8101775951101776079E081-29976
chr8101803597101803661E081-2394
chr8101803758101804338E081-1717
chr8101804391101804510E081-1545
chr8101851627101851825E08145572
chr8101851845101851917E08145790
chr8101775334101775644E082-30411