Sequence Name | Change(s) |
---|---|
GRCh38.p7 chr 20 | NC_000020.11:g.33879333C>T |
GRCh37.p13 chr 20 | NC_000020.10:g.32467139C>T |
Study | Population | Group | Sample # | Ref Allele | Alt Allele |
---|---|---|---|---|---|
1000Genomes | African | Sub | 1322 | C=0.811 | T=0.189 |
1000Genomes | American | Sub | 694 | C=0.840 | T=0.160 |
1000Genomes | East Asian | Sub | 1008 | C=0.389 | T=0.611 |
1000Genomes | Europe | Sub | 1006 | C=0.819 | T=0.181 |
1000Genomes | Global | Study-wide | 5008 | C=0.719 | T=0.281 |
1000Genomes | South Asian | Sub | 978 | C=0.750 | T=0.250 |
The Avon Longitudinal Study of Parents and Children | PARENT AND CHILD COHORT | Study-wide | 3854 | C=0.835 | T=0.165 |
The Genome Aggregation Database | African | Sub | 8698 | C=0.801 | T=0.199 |
The Genome Aggregation Database | American | Sub | 836 | C=0.830 | T=0.170 |
The Genome Aggregation Database | East Asian | Sub | 1602 | C=0.450 | T=0.550 |
The Genome Aggregation Database | Europe | Sub | 18440 | C=0.830 | T=0.169 |
The Genome Aggregation Database | Global | Study-wide | 29878 | C=0.801 | T=0.198 |
The Genome Aggregation Database | Other | Sub | 302 | C=0.790 | T=0.210 |
Trans-Omics for Precision Medicine | Global | Study-wide | 29118 | C=0.806 | T=0.193 |
UK 10K study - Twins | TWIN COHORT | Study-wide | 3708 | C=0.833 | T=0.167 |
PMID | Title | Author | Journal |
---|---|---|---|
21314694 | Genomewide association analysis of symptoms of alcohol dependence in the molecular genetics of schizophrenia (MGS2) control sample. | Kendler KS | Alcohol Clin Exp Res |
SNP ID | p-value | Traits | Study |
---|---|---|---|
rs6120401 | 0.000618 | alcohol dependence | 21314694 |
Position (v37) | eGene | GeneID | Variant | p-value | TSS | Tissue | |
---|---|---|---|---|---|---|---|
There is no eQTL annotation for this SNP |
Probe ID | Position | Gene | beta | p-value | |||
---|---|---|---|---|---|---|---|
There is no meQTL annotation for this SNP |
There is no significant Hi-C chromatin interaction data for this SNP.
Chromosome | Start | End | Region | Distance ( -/+ : Up/Downstream ) |
---|---|---|---|---|
chr20 | 32417483 | 32417533 | E067 | -49606 |
chr20 | 32417627 | 32418560 | E067 | -48579 |
chr20 | 32419800 | 32420547 | E067 | -46592 |
chr20 | 32420671 | 32420734 | E067 | -46405 |
chr20 | 32420829 | 32420954 | E067 | -46185 |
chr20 | 32421047 | 32421157 | E067 | -45982 |
chr20 | 32421196 | 32421776 | E067 | -45363 |
chr20 | 32425773 | 32426324 | E067 | -40815 |
chr20 | 32426344 | 32426375 | E067 | -40764 |
chr20 | 32426428 | 32426780 | E067 | -40359 |
chr20 | 32426838 | 32426928 | E067 | -40211 |
chr20 | 32426991 | 32427083 | E067 | -40056 |
chr20 | 32427131 | 32427286 | E067 | -39853 |
chr20 | 32427378 | 32427732 | E067 | -39407 |
chr20 | 32427843 | 32427912 | E067 | -39227 |
chr20 | 32428196 | 32428246 | E067 | -38893 |
chr20 | 32428318 | 32428427 | E067 | -38712 |
chr20 | 32428521 | 32428834 | E067 | -38305 |
chr20 | 32428862 | 32429297 | E067 | -37842 |
chr20 | 32429356 | 32429664 | E067 | -37475 |
chr20 | 32429674 | 32429820 | E067 | -37319 |
chr20 | 32430124 | 32430746 | E067 | -36393 |
chr20 | 32430752 | 32430834 | E067 | -36305 |
chr20 | 32430847 | 32431011 | E067 | -36128 |
chr20 | 32431025 | 32431186 | E067 | -35953 |
chr20 | 32431479 | 32431533 | E067 | -35606 |
chr20 | 32431539 | 32432083 | E067 | -35056 |
chr20 | 32433561 | 32433751 | E067 | -33388 |
chr20 | 32433767 | 32433918 | E067 | -33221 |
chr20 | 32434044 | 32434116 | E067 | -33023 |
chr20 | 32434155 | 32434278 | E067 | -32861 |
chr20 | 32434281 | 32434790 | E067 | -32349 |
chr20 | 32434792 | 32435276 | E067 | -31863 |
chr20 | 32435278 | 32435328 | E067 | -31811 |
chr20 | 32447544 | 32447889 | E067 | -19250 |
chr20 | 32447897 | 32448100 | E067 | -19039 |
chr20 | 32417483 | 32417533 | E068 | -49606 |
chr20 | 32417627 | 32418560 | E068 | -48579 |
chr20 | 32419573 | 32419730 | E068 | -47409 |
chr20 | 32420829 | 32420954 | E068 | -46185 |
chr20 | 32421047 | 32421157 | E068 | -45982 |
chr20 | 32421196 | 32421776 | E068 | -45363 |
chr20 | 32423588 | 32423862 | E068 | -43277 |
chr20 | 32423872 | 32423949 | E068 | -43190 |
chr20 | 32425159 | 32425203 | E068 | -41936 |
chr20 | 32425289 | 32425644 | E068 | -41495 |
chr20 | 32425773 | 32426324 | E068 | -40815 |
chr20 | 32426344 | 32426375 | E068 | -40764 |
chr20 | 32426428 | 32426780 | E068 | -40359 |
chr20 | 32426838 | 32426928 | E068 | -40211 |
chr20 | 32426991 | 32427083 | E068 | -40056 |
chr20 | 32427131 | 32427286 | E068 | -39853 |
chr20 | 32427378 | 32427732 | E068 | -39407 |
chr20 | 32427843 | 32427912 | E068 | -39227 |
chr20 | 32428196 | 32428246 | E068 | -38893 |
chr20 | 32428318 | 32428427 | E068 | -38712 |
chr20 | 32428521 | 32428834 | E068 | -38305 |
chr20 | 32428862 | 32429297 | E068 | -37842 |
chr20 | 32429356 | 32429664 | E068 | -37475 |
chr20 | 32429674 | 32429820 | E068 | -37319 |
chr20 | 32430124 | 32430746 | E068 | -36393 |
chr20 | 32430752 | 32430834 | E068 | -36305 |
chr20 | 32430847 | 32431011 | E068 | -36128 |
chr20 | 32431025 | 32431186 | E068 | -35953 |
chr20 | 32431479 | 32431533 | E068 | -35606 |
chr20 | 32431539 | 32432083 | E068 | -35056 |
chr20 | 32434155 | 32434278 | E068 | -32861 |
chr20 | 32434281 | 32434790 | E068 | -32349 |
chr20 | 32450367 | 32451290 | E068 | -15849 |
chr20 | 32417483 | 32417533 | E069 | -49606 |
chr20 | 32417627 | 32418560 | E069 | -48579 |
chr20 | 32419573 | 32419730 | E069 | -47409 |
chr20 | 32421047 | 32421157 | E069 | -45982 |
chr20 | 32421196 | 32421776 | E069 | -45363 |
chr20 | 32425289 | 32425644 | E069 | -41495 |
chr20 | 32425773 | 32426324 | E069 | -40815 |
chr20 | 32426344 | 32426375 | E069 | -40764 |
chr20 | 32426428 | 32426780 | E069 | -40359 |
chr20 | 32426838 | 32426928 | E069 | -40211 |
chr20 | 32426991 | 32427083 | E069 | -40056 |
chr20 | 32427131 | 32427286 | E069 | -39853 |
chr20 | 32428196 | 32428246 | E069 | -38893 |
chr20 | 32428318 | 32428427 | E069 | -38712 |
chr20 | 32428521 | 32428834 | E069 | -38305 |
chr20 | 32428862 | 32429297 | E069 | -37842 |
chr20 | 32429356 | 32429664 | E069 | -37475 |
chr20 | 32429674 | 32429820 | E069 | -37319 |
chr20 | 32430124 | 32430746 | E069 | -36393 |
chr20 | 32430752 | 32430834 | E069 | -36305 |
chr20 | 32430847 | 32431011 | E069 | -36128 |
chr20 | 32431025 | 32431186 | E069 | -35953 |
chr20 | 32433767 | 32433918 | E069 | -33221 |
chr20 | 32434044 | 32434116 | E069 | -33023 |
chr20 | 32434155 | 32434278 | E069 | -32861 |
chr20 | 32434281 | 32434790 | E069 | -32349 |
chr20 | 32450367 | 32451290 | E069 | -15849 |
chr20 | 32417627 | 32418560 | E070 | -48579 |
chr20 | 32419573 | 32419730 | E070 | -47409 |
chr20 | 32419800 | 32420547 | E070 | -46592 |
chr20 | 32420671 | 32420734 | E070 | -46405 |
chr20 | 32420829 | 32420954 | E070 | -46185 |
chr20 | 32421047 | 32421157 | E070 | -45982 |
chr20 | 32421196 | 32421776 | E070 | -45363 |
chr20 | 32421972 | 32422039 | E070 | -45100 |
chr20 | 32426428 | 32426780 | E070 | -40359 |
chr20 | 32426838 | 32426928 | E070 | -40211 |
chr20 | 32426991 | 32427083 | E070 | -40056 |
chr20 | 32427131 | 32427286 | E070 | -39853 |
chr20 | 32427378 | 32427732 | E070 | -39407 |
chr20 | 32428196 | 32428246 | E070 | -38893 |
chr20 | 32428318 | 32428427 | E070 | -38712 |
chr20 | 32429356 | 32429664 | E070 | -37475 |
chr20 | 32429674 | 32429820 | E070 | -37319 |
chr20 | 32430124 | 32430746 | E070 | -36393 |
chr20 | 32430752 | 32430834 | E070 | -36305 |
chr20 | 32430847 | 32431011 | E070 | -36128 |
chr20 | 32431025 | 32431186 | E070 | -35953 |
chr20 | 32431479 | 32431533 | E070 | -35606 |
chr20 | 32431539 | 32432083 | E070 | -35056 |
chr20 | 32432221 | 32432271 | E070 | -34868 |
chr20 | 32450367 | 32451290 | E070 | -15849 |
chr20 | 32417483 | 32417533 | E071 | -49606 |
chr20 | 32417627 | 32418560 | E071 | -48579 |
chr20 | 32419315 | 32419380 | E071 | -47759 |
chr20 | 32419573 | 32419730 | E071 | -47409 |
chr20 | 32419800 | 32420547 | E071 | -46592 |
chr20 | 32421047 | 32421157 | E071 | -45982 |
chr20 | 32421196 | 32421776 | E071 | -45363 |
chr20 | 32423588 | 32423862 | E071 | -43277 |
chr20 | 32423872 | 32423949 | E071 | -43190 |
chr20 | 32424414 | 32424662 | E071 | -42477 |
chr20 | 32424753 | 32424803 | E071 | -42336 |
chr20 | 32424959 | 32425076 | E071 | -42063 |
chr20 | 32425159 | 32425203 | E071 | -41936 |
chr20 | 32425289 | 32425644 | E071 | -41495 |
chr20 | 32425773 | 32426324 | E071 | -40815 |
chr20 | 32426344 | 32426375 | E071 | -40764 |
chr20 | 32426428 | 32426780 | E071 | -40359 |
chr20 | 32426838 | 32426928 | E071 | -40211 |
chr20 | 32426991 | 32427083 | E071 | -40056 |
chr20 | 32427131 | 32427286 | E071 | -39853 |
chr20 | 32427378 | 32427732 | E071 | -39407 |
chr20 | 32427843 | 32427912 | E071 | -39227 |
chr20 | 32428196 | 32428246 | E071 | -38893 |
chr20 | 32428318 | 32428427 | E071 | -38712 |
chr20 | 32428521 | 32428834 | E071 | -38305 |
chr20 | 32428862 | 32429297 | E071 | -37842 |
chr20 | 32429356 | 32429664 | E071 | -37475 |
chr20 | 32429674 | 32429820 | E071 | -37319 |
chr20 | 32430124 | 32430746 | E071 | -36393 |
chr20 | 32430752 | 32430834 | E071 | -36305 |
chr20 | 32430847 | 32431011 | E071 | -36128 |
chr20 | 32431025 | 32431186 | E071 | -35953 |
chr20 | 32431479 | 32431533 | E071 | -35606 |
chr20 | 32431539 | 32432083 | E071 | -35056 |
chr20 | 32434044 | 32434116 | E071 | -33023 |
chr20 | 32434155 | 32434278 | E071 | -32861 |
chr20 | 32434281 | 32434790 | E071 | -32349 |
chr20 | 32434792 | 32435276 | E071 | -31863 |
chr20 | 32435278 | 32435328 | E071 | -31811 |
chr20 | 32450367 | 32451290 | E071 | -15849 |
chr20 | 32458822 | 32458980 | E071 | -8159 |
chr20 | 32459312 | 32459432 | E071 | -7707 |
chr20 | 32417483 | 32417533 | E072 | -49606 |
chr20 | 32417627 | 32418560 | E072 | -48579 |
chr20 | 32419573 | 32419730 | E072 | -47409 |
chr20 | 32419800 | 32420547 | E072 | -46592 |
chr20 | 32420671 | 32420734 | E072 | -46405 |
chr20 | 32420829 | 32420954 | E072 | -46185 |
chr20 | 32421047 | 32421157 | E072 | -45982 |
chr20 | 32423872 | 32423949 | E072 | -43190 |
chr20 | 32424414 | 32424662 | E072 | -42477 |
chr20 | 32424753 | 32424803 | E072 | -42336 |
chr20 | 32424959 | 32425076 | E072 | -42063 |
chr20 | 32425159 | 32425203 | E072 | -41936 |
chr20 | 32425289 | 32425644 | E072 | -41495 |
chr20 | 32425773 | 32426324 | E072 | -40815 |
chr20 | 32426344 | 32426375 | E072 | -40764 |
chr20 | 32426428 | 32426780 | E072 | -40359 |
chr20 | 32426838 | 32426928 | E072 | -40211 |
chr20 | 32426991 | 32427083 | E072 | -40056 |
chr20 | 32427131 | 32427286 | E072 | -39853 |
chr20 | 32427378 | 32427732 | E072 | -39407 |
chr20 | 32427843 | 32427912 | E072 | -39227 |
chr20 | 32428196 | 32428246 | E072 | -38893 |
chr20 | 32428318 | 32428427 | E072 | -38712 |
chr20 | 32428521 | 32428834 | E072 | -38305 |
chr20 | 32428862 | 32429297 | E072 | -37842 |
chr20 | 32429356 | 32429664 | E072 | -37475 |
chr20 | 32429674 | 32429820 | E072 | -37319 |
chr20 | 32430124 | 32430746 | E072 | -36393 |
chr20 | 32430752 | 32430834 | E072 | -36305 |
chr20 | 32430847 | 32431011 | E072 | -36128 |
chr20 | 32434281 | 32434790 | E072 | -32349 |
chr20 | 32434792 | 32435276 | E072 | -31863 |
chr20 | 32435278 | 32435328 | E072 | -31811 |
chr20 | 32446890 | 32447506 | E072 | -19633 |
chr20 | 32447544 | 32447889 | E072 | -19250 |
chr20 | 32447897 | 32448100 | E072 | -19039 |
chr20 | 32459312 | 32459432 | E072 | -7707 |
chr20 | 32417483 | 32417533 | E073 | -49606 |
chr20 | 32417627 | 32418560 | E073 | -48579 |
chr20 | 32419800 | 32420547 | E073 | -46592 |
chr20 | 32421196 | 32421776 | E073 | -45363 |
chr20 | 32426838 | 32426928 | E073 | -40211 |
chr20 | 32426991 | 32427083 | E073 | -40056 |
chr20 | 32427131 | 32427286 | E073 | -39853 |
chr20 | 32427378 | 32427732 | E073 | -39407 |
chr20 | 32427843 | 32427912 | E073 | -39227 |
chr20 | 32428196 | 32428246 | E073 | -38893 |
chr20 | 32428318 | 32428427 | E073 | -38712 |
chr20 | 32428521 | 32428834 | E073 | -38305 |
chr20 | 32428862 | 32429297 | E073 | -37842 |
chr20 | 32429356 | 32429664 | E073 | -37475 |
chr20 | 32429674 | 32429820 | E073 | -37319 |
chr20 | 32430124 | 32430746 | E073 | -36393 |
chr20 | 32430752 | 32430834 | E073 | -36305 |
chr20 | 32430847 | 32431011 | E073 | -36128 |
chr20 | 32433767 | 32433918 | E073 | -33221 |
chr20 | 32434044 | 32434116 | E073 | -33023 |
chr20 | 32434155 | 32434278 | E073 | -32861 |
chr20 | 32434281 | 32434790 | E073 | -32349 |
chr20 | 32450367 | 32451290 | E073 | -15849 |
chr20 | 32417483 | 32417533 | E074 | -49606 |
chr20 | 32417627 | 32418560 | E074 | -48579 |
chr20 | 32419573 | 32419730 | E074 | -47409 |
chr20 | 32419800 | 32420547 | E074 | -46592 |
chr20 | 32420829 | 32420954 | E074 | -46185 |
chr20 | 32421047 | 32421157 | E074 | -45982 |
chr20 | 32421196 | 32421776 | E074 | -45363 |
chr20 | 32421972 | 32422039 | E074 | -45100 |
chr20 | 32423588 | 32423862 | E074 | -43277 |
chr20 | 32423872 | 32423949 | E074 | -43190 |
chr20 | 32425773 | 32426324 | E074 | -40815 |
chr20 | 32426344 | 32426375 | E074 | -40764 |
chr20 | 32426428 | 32426780 | E074 | -40359 |
chr20 | 32426838 | 32426928 | E074 | -40211 |
chr20 | 32426991 | 32427083 | E074 | -40056 |
chr20 | 32427131 | 32427286 | E074 | -39853 |
chr20 | 32427378 | 32427732 | E074 | -39407 |
chr20 | 32427843 | 32427912 | E074 | -39227 |
chr20 | 32428196 | 32428246 | E074 | -38893 |
chr20 | 32428318 | 32428427 | E074 | -38712 |
chr20 | 32428521 | 32428834 | E074 | -38305 |
chr20 | 32428862 | 32429297 | E074 | -37842 |
chr20 | 32429356 | 32429664 | E074 | -37475 |
chr20 | 32429674 | 32429820 | E074 | -37319 |
chr20 | 32430124 | 32430746 | E074 | -36393 |
chr20 | 32430752 | 32430834 | E074 | -36305 |
chr20 | 32430847 | 32431011 | E074 | -36128 |
chr20 | 32431025 | 32431186 | E074 | -35953 |
chr20 | 32434044 | 32434116 | E074 | -33023 |
chr20 | 32434155 | 32434278 | E074 | -32861 |
chr20 | 32434281 | 32434790 | E074 | -32349 |
chr20 | 32450367 | 32451290 | E074 | -15849 |
chr20 | 32417483 | 32417533 | E081 | -49606 |
chr20 | 32417627 | 32418560 | E081 | -48579 |
chr20 | 32419573 | 32419730 | E081 | -47409 |
chr20 | 32419800 | 32420547 | E081 | -46592 |
chr20 | 32420671 | 32420734 | E081 | -46405 |
chr20 | 32420829 | 32420954 | E081 | -46185 |
chr20 | 32421047 | 32421157 | E081 | -45982 |
chr20 | 32421196 | 32421776 | E081 | -45363 |
chr20 | 32426991 | 32427083 | E081 | -40056 |
chr20 | 32427131 | 32427286 | E081 | -39853 |
chr20 | 32427378 | 32427732 | E081 | -39407 |
chr20 | 32430124 | 32430746 | E081 | -36393 |
chr20 | 32430752 | 32430834 | E081 | -36305 |
chr20 | 32430847 | 32431011 | E081 | -36128 |
chr20 | 32431025 | 32431186 | E081 | -35953 |
chr20 | 32431479 | 32431533 | E081 | -35606 |
chr20 | 32431539 | 32432083 | E081 | -35056 |
chr20 | 32432221 | 32432271 | E081 | -34868 |
chr20 | 32432626 | 32432682 | E081 | -34457 |
chr20 | 32432803 | 32432853 | E081 | -34286 |
chr20 | 32433392 | 32433560 | E081 | -33579 |
chr20 | 32433561 | 32433751 | E081 | -33388 |
chr20 | 32433767 | 32433918 | E081 | -33221 |
chr20 | 32434044 | 32434116 | E081 | -33023 |
chr20 | 32434155 | 32434278 | E081 | -32861 |
chr20 | 32434281 | 32434790 | E081 | -32349 |
chr20 | 32434792 | 32435276 | E081 | -31863 |
chr20 | 32435278 | 32435328 | E081 | -31811 |
chr20 | 32435843 | 32435918 | E081 | -31221 |
chr20 | 32435998 | 32436078 | E081 | -31061 |
chr20 | 32436203 | 32436429 | E081 | -30710 |
chr20 | 32436476 | 32436526 | E081 | -30613 |
chr20 | 32436651 | 32436710 | E081 | -30429 |
chr20 | 32453914 | 32453984 | E081 | -13155 |
chr20 | 32454347 | 32454471 | E081 | -12668 |
chr20 | 32454611 | 32455030 | E081 | -12109 |
chr20 | 32455122 | 32455296 | E081 | -11843 |
chr20 | 32455393 | 32455447 | E081 | -11692 |
chr20 | 32458822 | 32458980 | E081 | -8159 |
chr20 | 32459312 | 32459432 | E081 | -7707 |
chr20 | 32505533 | 32505583 | E081 | 38394 |
chr20 | 32506013 | 32506112 | E081 | 38874 |
chr20 | 32506182 | 32506232 | E081 | 39043 |
chr20 | 32417483 | 32417533 | E082 | -49606 |
chr20 | 32417627 | 32418560 | E082 | -48579 |
chr20 | 32419315 | 32419380 | E082 | -47759 |
chr20 | 32420671 | 32420734 | E082 | -46405 |
chr20 | 32420829 | 32420954 | E082 | -46185 |
chr20 | 32421047 | 32421157 | E082 | -45982 |
chr20 | 32421196 | 32421776 | E082 | -45363 |
chr20 | 32425289 | 32425644 | E082 | -41495 |
chr20 | 32425773 | 32426324 | E082 | -40815 |
chr20 | 32426344 | 32426375 | E082 | -40764 |
chr20 | 32426428 | 32426780 | E082 | -40359 |
chr20 | 32426838 | 32426928 | E082 | -40211 |
chr20 | 32426991 | 32427083 | E082 | -40056 |
chr20 | 32427131 | 32427286 | E082 | -39853 |
chr20 | 32427378 | 32427732 | E082 | -39407 |
chr20 | 32427843 | 32427912 | E082 | -39227 |
chr20 | 32428196 | 32428246 | E082 | -38893 |
chr20 | 32428318 | 32428427 | E082 | -38712 |
chr20 | 32428521 | 32428834 | E082 | -38305 |
chr20 | 32428862 | 32429297 | E082 | -37842 |
chr20 | 32429356 | 32429664 | E082 | -37475 |
chr20 | 32429674 | 32429820 | E082 | -37319 |
chr20 | 32430124 | 32430746 | E082 | -36393 |
chr20 | 32430752 | 32430834 | E082 | -36305 |
chr20 | 32430847 | 32431011 | E082 | -36128 |
chr20 | 32433561 | 32433751 | E082 | -33388 |
chr20 | 32433767 | 32433918 | E082 | -33221 |
chr20 | 32434044 | 32434116 | E082 | -33023 |
chr20 | 32434155 | 32434278 | E082 | -32861 |
chr20 | 32434281 | 32434790 | E082 | -32349 |
chr20 | 32453914 | 32453984 | E082 | -13155 |
chr20 | 32454347 | 32454471 | E082 | -12668 |
chr20 | 32454611 | 32455030 | E082 | -12109 |
chr20 | 32455122 | 32455296 | E082 | -11843 |
chr20 | 32459312 | 32459432 | E082 | -7707 |
chr20 | 32459981 | 32460049 | E082 | -7090 |