SNP Detail Info-rs62202398

Organism: Homo sapiens

Alleles: G>A / G>C

Gene : Feature

None

p-value: Check p-value

Variation Type: SNV (Single Nucleotide Variation)

Frequency:

A=0093 (2787/29894,GnomAD)
A=0163 (815/5008,1000G)
A=0055 (212/3854,ALSPAC)
A=0068 (252/3708,TWINSUK)

Position: chr20:48172481 (GRCh38.p7) (20q13.13)

Phenotype: AD

Dataset:

GWASdb2

Publications: 1 publication(s)

Genomic View: See rs on genome

Enhancer: 0 Enhancer around

Promoter: 0 Promoter around

Study	Population	Group	Sample #	Ref Allele	Alt Allele
1000Genomes	African	Sub	1322	G=0.911	A=0.089
1000Genomes	American	Sub	694	G=0.850	A=0.150
1000Genomes	East Asian	Sub	1008	G=0.708	A=0.292
1000Genomes	Europe	Sub	1006	G=0.938	A=0.062
1000Genomes	Global	Study-wide	5008	G=0.837	A=0.163
1000Genomes	South Asian	Sub	978	G=0.760	A=0.240
The Avon Longitudinal Study of Parents and Children	PARENT AND CHILD COHORT	Study-wide	3854	G=0.945	A=0.055
The Genome Aggregation Database	African	Sub	8698	G=0.913	C=0.000
The Genome Aggregation Database	American	Sub	836	G=0.850	C=0.00,
The Genome Aggregation Database	East Asian	Sub	1614	G=0.726	C=0.000
The Genome Aggregation Database	Europe	Sub	18446	G=0.922	C=0.000
The Genome Aggregation Database	Global	Study-wide	29894	G=0.906	C=0.000
The Genome Aggregation Database	Other	Sub	300	G=0.890	C=0.00,
UK 10K study - Twins	TWIN COHORT	Study-wide	3708	G=0.932	A=0.068

PMID	Title	Author	Journal
23743675	A meta-analysis of two genome-wide association studies to identify novel loci for maximum number of alcoholic drinks.	Kapoor M	Hum Genet

SNP ID	p-value	Traits	Study
rs62202398	9E-06	alcohol consumption	23743675

Position (v37)	eGene	GeneID	Variant	p-value	TSS	Tissue
There is no eQTL annotation for this SNP

Probe ID	Position	Gene	beta	p-value
There is no meQTL annotation for this SNP

rs62202398