SNP Detail Info-rs6487673

Sequence Name	Change(s)
GRCh38.p7 chr 12	NC_000012.12:g.28285474T>C
GRCh37.p13 chr 12	NC_000012.11:g.28438407T>C

Molecule type	Change	Amino acid[Codon]	SO Term
CCDC91 transcript	NM_018318.3:c.	N/A	Intron Variant
CCDC91 transcript variant X2	XM_005253413.1:c.	N/A	Intron Variant
CCDC91 transcript variant X2	XM_005253414.1:c.	N/A	Intron Variant
CCDC91 transcript variant X3	XM_006719104.2:c.	N/A	Intron Variant
CCDC91 transcript variant X7	XM_006719105.1:c.	N/A	Intron Variant
CCDC91 transcript variant X5	XM_011520729.2:c.	N/A	Intron Variant
CCDC91 transcript variant X19	XM_011520734.1:c.	N/A	Intron Variant
CCDC91 transcript variant X15	XM_011520735.1:c.	N/A	Intron Variant
CCDC91 transcript variant X5	XM_017019569.1:c.	N/A	Intron Variant
CCDC91 transcript variant X9	XM_017019570.1:c.	N/A	Intron Variant
CCDC91 transcript variant X10	XM_017019571.1:c.	N/A	Intron Variant
CCDC91 transcript variant X10	XM_017019572.1:c.	N/A	Intron Variant
CCDC91 transcript variant X13	XM_017019574.1:c.	N/A	Intron Variant
CCDC91 transcript variant X15	XM_017019575.1:c.	N/A	Intron Variant
CCDC91 transcript variant X16	XM_017019576.1:c.	N/A	Intron Variant
CCDC91 transcript variant X17	XM_017019577.1:c.	N/A	Intron Variant
CCDC91 transcript variant X14	XM_005253415.1:c.	N/A	Genic Upstream Transcript Variant
CCDC91 transcript variant X1	XM_006719103.3:c.	N/A	Genic Upstream Transcript Variant
CCDC91 transcript variant X8	XM_011520731.2:c.	N/A	Genic Upstream Transcript Variant
CCDC91 transcript variant X18	XM_011520733.2:c.	N/A	Genic Upstream Transcript Variant
CCDC91 transcript variant X12	XM_017019573.1:c.	N/A	Genic Upstream Transcript Variant

Study	Population	Group	Sample #	Ref Allele	Alt Allele
1000Genomes	African	Sub	1322	T=0.336	C=0.664
1000Genomes	American	Sub	694	T=0.040	C=0.960
1000Genomes	East Asian	Sub	1008	T=0.000	C=1.000
1000Genomes	Europe	Sub	1006	T=0.005	C=0.995
1000Genomes	Global	Study-wide	5008	T=0.095	C=0.905
1000Genomes	South Asian	Sub	978	T=0.000	C=1.000
The Avon Longitudinal Study of Parents and Children	PARENT AND CHILD COHORT	Study-wide	3854	T=0.003	C=0.997
The Genome Aggregation Database	African	Sub	8700	T=0.279	C=0.721
The Genome Aggregation Database	American	Sub	838	T=0.030	C=0.970
The Genome Aggregation Database	East Asian	Sub	1614	T=0.000	C=1.000
The Genome Aggregation Database	Europe	Sub	18482	T=0.002	C=0.997
The Genome Aggregation Database	Global	Study-wide	29936	T=0.084	C=0.915
The Genome Aggregation Database	Other	Sub	302	T=0.070	C=0.930
Trans-Omics for Precision Medicine	Global	Study-wide	29118	T=0.133	C=0.867
UK 10K study - Twins	TWIN COHORT	Study-wide	3708	T=0.006	C=0.994

PMID	Title	Author	Journal

SNP ID	p-value	Traits	Study
rs6487673	2.54E-10	alcohol consumption	pha001398

Position (v37)	eGene	GeneID	Variant	p-value	TSS	Tissue
There is no eQTL annotation for this SNP

Probe ID	Position	Gene	beta	p-value
There is no meQTL annotation for this SNP

Chromosome	Start	End	Region	Distance ( -/+ : Up/Downstream )
chr12	28401194	28401256	E068	-37151
chr12	28401267	28401335	E068	-37072
chr12	28401427	28401507	E068	-36900
chr12	28401536	28401649	E068	-36758
chr12	28401723	28402023	E068	-36384
chr12	28402495	28402645	E071	-35762
chr12	28402681	28402721	E071	-35686
chr12	28402749	28402836	E071	-35571
chr12	28402925	28403007	E071	-35400
chr12	28400902	28400994	E074	-37413
chr12	28401194	28401256	E074	-37151
chr12	28401267	28401335	E074	-37072
chr12	28401427	28401507	E074	-36900
chr12	28401536	28401649	E074	-36758

rs6487673