Sequence Name | Change(s) |
---|---|
GRCh38.p7 chr 1 | NC_000001.11:g.242710653C>A |
GRCh38.p7 chr 1 | NC_000001.11:g.242710653C>T |
GRCh37.p13 chr 1 | NC_000001.10:g.242873955C>A |
GRCh37.p13 chr 1 | NC_000001.10:g.242873955C>T |
Study | Population | Group | Sample # | Ref Allele | Alt Allele |
---|---|---|---|---|---|
1000Genomes | African | Sub | 1322 | C=0.375 | A=0.625 |
1000Genomes | American | Sub | 694 | C=0.730 | A=0.270 |
1000Genomes | East Asian | Sub | 1008 | C=0.676 | A=0.324 |
1000Genomes | Europe | Sub | 1006 | C=0.832 | A=0.168 |
1000Genomes | Global | Study-wide | 5008 | C=0.655 | A=0.345 |
1000Genomes | South Asian | Sub | 978 | C=0.780 | A=0.220 |
The Avon Longitudinal Study of Parents and Children | PARENT AND CHILD COHORT | Study-wide | 3854 | C=0.838 | A=0.162 |
The Genome Aggregation Database | African | Sub | 8708 | C=0.450 | A=0.550 |
The Genome Aggregation Database | American | Sub | 838 | C=0.730 | A=0.27, |
The Genome Aggregation Database | East Asian | Sub | 1616 | C=0.678 | A=0.322 |
The Genome Aggregation Database | Europe | Sub | 18478 | C=0.823 | A=0.176 |
The Genome Aggregation Database | Global | Study-wide | 29942 | C=0.703 | A=0.296 |
The Genome Aggregation Database | Other | Sub | 302 | C=0.740 | A=0.26, |
Trans-Omics for Precision Medicine | Global | Study-wide | 29116 | C=0.641 | A=0.358 |
UK 10K study - Twins | TWIN COHORT | Study-wide | 3708 | C=0.833 | A=0.167 |
PMID | Title | Author | Journal |
---|---|---|---|
24277619 | ALDH2 is associated to alcohol dependence and is the major genetic determinant of "daily maximum drinks" in a GWAS study of an isolated rural Chinese sample. | Quillen EE | Am J Med Genet B Neuropsychiatr Genet |
SNP ID | p-value | Traits | Study |
---|---|---|---|
rs6657754 | 4.1E-05 | alcohol consumption (maxi-drinks) | 24277619 |
Position (v37) | eGene | GeneID | Variant | p-value | TSS | Tissue | |
---|---|---|---|---|---|---|---|
There is no eQTL annotation for this SNP |
Probe ID | Position | Gene | beta | p-value | |||
---|---|---|---|---|---|---|---|
There is no meQTL annotation for this SNP |
There is no significant Hi-C chromatin interaction data for this SNP.
Chromosome | Start | End | Region | Distance ( -/+ : Up/Downstream ) |
---|---|---|---|---|
chr1 | 7729336 | 7730002 | E067 | -49089 |
chr1 | 7730096 | 7730344 | E067 | -48747 |
chr1 | 7730418 | 7730841 | E067 | -48250 |
chr1 | 7730971 | 7731039 | E067 | -48052 |
chr1 | 7763052 | 7763177 | E067 | -15914 |
chr1 | 7763219 | 7763279 | E067 | -15812 |
chr1 | 7780883 | 7780972 | E067 | 1792 |
chr1 | 7781248 | 7781310 | E067 | 2157 |
chr1 | 7786629 | 7787057 | E067 | 7538 |
chr1 | 7788614 | 7788674 | E067 | 9523 |
chr1 | 7788991 | 7789110 | E067 | 9900 |
chr1 | 7812351 | 7813427 | E067 | 33260 |
chr1 | 7820494 | 7820618 | E067 | 41403 |
chr1 | 7821263 | 7821404 | E067 | 42172 |
chr1 | 7751740 | 7751922 | E068 | -27169 |
chr1 | 7752074 | 7752124 | E068 | -26967 |
chr1 | 7752200 | 7752401 | E068 | -26690 |
chr1 | 7754493 | 7754606 | E068 | -24485 |
chr1 | 7755129 | 7755174 | E068 | -23917 |
chr1 | 7755497 | 7755547 | E068 | -23544 |
chr1 | 7755622 | 7755785 | E068 | -23306 |
chr1 | 7762527 | 7762700 | E068 | -16391 |
chr1 | 7763052 | 7763177 | E068 | -15914 |
chr1 | 7782572 | 7782631 | E068 | 3481 |
chr1 | 7786629 | 7787057 | E068 | 7538 |
chr1 | 7788991 | 7789110 | E068 | 9900 |
chr1 | 7812351 | 7813427 | E068 | 33260 |
chr1 | 7730418 | 7730841 | E069 | -48250 |
chr1 | 7755129 | 7755174 | E069 | -23917 |
chr1 | 7755497 | 7755547 | E069 | -23544 |
chr1 | 7762527 | 7762700 | E069 | -16391 |
chr1 | 7763052 | 7763177 | E069 | -15914 |
chr1 | 7776556 | 7777141 | E069 | -1950 |
chr1 | 7788991 | 7789110 | E069 | 9900 |
chr1 | 7812351 | 7813427 | E069 | 33260 |
chr1 | 7820494 | 7820618 | E069 | 41403 |
chr1 | 7821263 | 7821404 | E069 | 42172 |
chr1 | 7730096 | 7730344 | E070 | -48747 |
chr1 | 7730418 | 7730841 | E070 | -48250 |
chr1 | 7730971 | 7731039 | E070 | -48052 |
chr1 | 7732796 | 7732905 | E070 | -46186 |
chr1 | 7732957 | 7733376 | E070 | -45715 |
chr1 | 7733482 | 7733532 | E070 | -45559 |
chr1 | 7738767 | 7739067 | E070 | -40024 |
chr1 | 7739580 | 7739766 | E070 | -39325 |
chr1 | 7742307 | 7742367 | E070 | -36724 |
chr1 | 7744417 | 7744480 | E070 | -34611 |
chr1 | 7744500 | 7744592 | E070 | -34499 |
chr1 | 7744676 | 7744730 | E070 | -34361 |
chr1 | 7747974 | 7748064 | E070 | -31027 |
chr1 | 7755497 | 7755547 | E070 | -23544 |
chr1 | 7755622 | 7755785 | E070 | -23306 |
chr1 | 7757824 | 7757878 | E070 | -21213 |
chr1 | 7763052 | 7763177 | E070 | -15914 |
chr1 | 7788266 | 7788436 | E070 | 9175 |
chr1 | 7812351 | 7813427 | E070 | 33260 |
chr1 | 7729336 | 7730002 | E071 | -49089 |
chr1 | 7730096 | 7730344 | E071 | -48747 |
chr1 | 7730418 | 7730841 | E071 | -48250 |
chr1 | 7730971 | 7731039 | E071 | -48052 |
chr1 | 7741441 | 7741495 | E071 | -37596 |
chr1 | 7741554 | 7741664 | E071 | -37427 |
chr1 | 7749700 | 7749803 | E071 | -29288 |
chr1 | 7763052 | 7763177 | E071 | -15914 |
chr1 | 7763219 | 7763279 | E071 | -15812 |
chr1 | 7786629 | 7787057 | E071 | 7538 |
chr1 | 7812351 | 7813427 | E071 | 33260 |
chr1 | 7730418 | 7730841 | E072 | -48250 |
chr1 | 7730971 | 7731039 | E072 | -48052 |
chr1 | 7738767 | 7739067 | E072 | -40024 |
chr1 | 7739580 | 7739766 | E072 | -39325 |
chr1 | 7741441 | 7741495 | E072 | -37596 |
chr1 | 7741554 | 7741664 | E072 | -37427 |
chr1 | 7755497 | 7755547 | E072 | -23544 |
chr1 | 7755622 | 7755785 | E072 | -23306 |
chr1 | 7762527 | 7762700 | E072 | -16391 |
chr1 | 7763052 | 7763177 | E072 | -15914 |
chr1 | 7763219 | 7763279 | E072 | -15812 |
chr1 | 7776556 | 7777141 | E072 | -1950 |
chr1 | 7786629 | 7787057 | E072 | 7538 |
chr1 | 7788991 | 7789110 | E072 | 9900 |
chr1 | 7789568 | 7789757 | E072 | 10477 |
chr1 | 7812351 | 7813427 | E072 | 33260 |
chr1 | 7820494 | 7820618 | E072 | 41403 |
chr1 | 7730418 | 7730841 | E073 | -48250 |
chr1 | 7730971 | 7731039 | E073 | -48052 |
chr1 | 7739580 | 7739766 | E073 | -39325 |
chr1 | 7762527 | 7762700 | E073 | -16391 |
chr1 | 7763052 | 7763177 | E073 | -15914 |
chr1 | 7763219 | 7763279 | E073 | -15812 |
chr1 | 7786629 | 7787057 | E073 | 7538 |
chr1 | 7788991 | 7789110 | E073 | 9900 |
chr1 | 7812351 | 7813427 | E073 | 33260 |
chr1 | 7820494 | 7820618 | E073 | 41403 |
chr1 | 7729336 | 7730002 | E074 | -49089 |
chr1 | 7730096 | 7730344 | E074 | -48747 |
chr1 | 7762527 | 7762700 | E074 | -16391 |
chr1 | 7763052 | 7763177 | E074 | -15914 |
chr1 | 7763219 | 7763279 | E074 | -15812 |
chr1 | 7786629 | 7787057 | E074 | 7538 |
chr1 | 7788614 | 7788674 | E074 | 9523 |
chr1 | 7788991 | 7789110 | E074 | 9900 |
chr1 | 7812351 | 7813427 | E074 | 33260 |
chr1 | 7820494 | 7820618 | E074 | 41403 |
chr1 | 7729336 | 7730002 | E081 | -49089 |
chr1 | 7730096 | 7730344 | E081 | -48747 |
chr1 | 7730418 | 7730841 | E081 | -48250 |
chr1 | 7730971 | 7731039 | E081 | -48052 |
chr1 | 7739580 | 7739766 | E081 | -39325 |
chr1 | 7741441 | 7741495 | E081 | -37596 |
chr1 | 7741554 | 7741664 | E081 | -37427 |
chr1 | 7755497 | 7755547 | E081 | -23544 |
chr1 | 7755622 | 7755785 | E081 | -23306 |
chr1 | 7762527 | 7762700 | E081 | -16391 |
chr1 | 7763052 | 7763177 | E081 | -15914 |
chr1 | 7763219 | 7763279 | E081 | -15812 |
chr1 | 7767308 | 7767348 | E081 | -11743 |
chr1 | 7775867 | 7775944 | E081 | -3147 |
chr1 | 7776556 | 7777141 | E081 | -1950 |
chr1 | 7777883 | 7778384 | E081 | -707 |
chr1 | 7780883 | 7780972 | E081 | 1792 |
chr1 | 7781248 | 7781310 | E081 | 2157 |
chr1 | 7786629 | 7787057 | E081 | 7538 |
chr1 | 7788266 | 7788436 | E081 | 9175 |
chr1 | 7788614 | 7788674 | E081 | 9523 |
chr1 | 7788991 | 7789110 | E081 | 9900 |
chr1 | 7812351 | 7813427 | E081 | 33260 |
chr1 | 7729336 | 7730002 | E082 | -49089 |
chr1 | 7730096 | 7730344 | E082 | -48747 |
chr1 | 7730418 | 7730841 | E082 | -48250 |
chr1 | 7730971 | 7731039 | E082 | -48052 |
chr1 | 7767308 | 7767348 | E082 | -11743 |
chr1 | 7767438 | 7767497 | E082 | -11594 |
chr1 | 7775867 | 7775944 | E082 | -3147 |
chr1 | 7776556 | 7777141 | E082 | -1950 |
chr1 | 7780883 | 7780972 | E082 | 1792 |
chr1 | 7781248 | 7781310 | E082 | 2157 |
chr1 | 7782572 | 7782631 | E082 | 3481 |
chr1 | 7782672 | 7782738 | E082 | 3581 |
chr1 | 7782741 | 7782945 | E082 | 3650 |
chr1 | 7788614 | 7788674 | E082 | 9523 |
chr1 | 7788991 | 7789110 | E082 | 9900 |
Chromosome | Start | End | Region | Distance(-/+:Up/Downstream) |
---|---|---|---|---|
chr1 | 7740055 | 7741372 | E067 | -37719 |
chr1 | 7763794 | 7763895 | E067 | -15196 |
chr1 | 7763899 | 7764274 | E067 | -14817 |
chr1 | 7764286 | 7764361 | E067 | -14730 |
chr1 | 7764448 | 7765049 | E067 | -14042 |
chr1 | 7765096 | 7765199 | E067 | -13892 |
chr1 | 7765234 | 7765343 | E067 | -13748 |
chr1 | 7765406 | 7766078 | E067 | -13013 |
chr1 | 7740055 | 7741372 | E068 | -37719 |
chr1 | 7763794 | 7763895 | E068 | -15196 |
chr1 | 7763899 | 7764274 | E068 | -14817 |
chr1 | 7765096 | 7765199 | E068 | -13892 |
chr1 | 7765234 | 7765343 | E068 | -13748 |
chr1 | 7765406 | 7766078 | E068 | -13013 |
chr1 | 7766079 | 7766556 | E068 | -12535 |
chr1 | 7740055 | 7741372 | E069 | -37719 |
chr1 | 7763794 | 7763895 | E069 | -15196 |
chr1 | 7763899 | 7764274 | E069 | -14817 |
chr1 | 7764286 | 7764361 | E069 | -14730 |
chr1 | 7764448 | 7765049 | E069 | -14042 |
chr1 | 7765096 | 7765199 | E069 | -13892 |
chr1 | 7765234 | 7765343 | E069 | -13748 |
chr1 | 7765406 | 7766078 | E069 | -13013 |
chr1 | 7766079 | 7766556 | E069 | -12535 |
chr1 | 7740055 | 7741372 | E070 | -37719 |
chr1 | 7763794 | 7763895 | E070 | -15196 |
chr1 | 7763899 | 7764274 | E070 | -14817 |
chr1 | 7764286 | 7764361 | E070 | -14730 |
chr1 | 7764448 | 7765049 | E070 | -14042 |
chr1 | 7765096 | 7765199 | E070 | -13892 |
chr1 | 7765406 | 7766078 | E070 | -13013 |
chr1 | 7766079 | 7766556 | E070 | -12535 |
chr1 | 7740055 | 7741372 | E071 | -37719 |
chr1 | 7763794 | 7763895 | E071 | -15196 |
chr1 | 7763899 | 7764274 | E071 | -14817 |
chr1 | 7764286 | 7764361 | E071 | -14730 |
chr1 | 7764448 | 7765049 | E071 | -14042 |
chr1 | 7765096 | 7765199 | E071 | -13892 |
chr1 | 7765234 | 7765343 | E071 | -13748 |
chr1 | 7765406 | 7766078 | E071 | -13013 |
chr1 | 7766079 | 7766556 | E071 | -12535 |
chr1 | 7740055 | 7741372 | E072 | -37719 |
chr1 | 7763794 | 7763895 | E072 | -15196 |
chr1 | 7763899 | 7764274 | E072 | -14817 |
chr1 | 7764286 | 7764361 | E072 | -14730 |
chr1 | 7764448 | 7765049 | E072 | -14042 |
chr1 | 7765096 | 7765199 | E072 | -13892 |
chr1 | 7765234 | 7765343 | E072 | -13748 |
chr1 | 7765406 | 7766078 | E072 | -13013 |
chr1 | 7766079 | 7766556 | E072 | -12535 |
chr1 | 7740055 | 7741372 | E073 | -37719 |
chr1 | 7765096 | 7765199 | E073 | -13892 |
chr1 | 7765234 | 7765343 | E073 | -13748 |
chr1 | 7765406 | 7766078 | E073 | -13013 |
chr1 | 7766079 | 7766556 | E073 | -12535 |
chr1 | 7740055 | 7741372 | E074 | -37719 |
chr1 | 7765234 | 7765343 | E074 | -13748 |
chr1 | 7765406 | 7766078 | E074 | -13013 |
chr1 | 7766079 | 7766556 | E074 | -12535 |
chr1 | 7763794 | 7763895 | E081 | -15196 |
chr1 | 7765406 | 7766078 | E081 | -13013 |
chr1 | 7766079 | 7766556 | E081 | -12535 |
chr1 | 7740055 | 7741372 | E082 | -37719 |
chr1 | 7763794 | 7763895 | E082 | -15196 |
chr1 | 7763899 | 7764274 | E082 | -14817 |
chr1 | 7764286 | 7764361 | E082 | -14730 |
chr1 | 7764448 | 7765049 | E082 | -14042 |
chr1 | 7765096 | 7765199 | E082 | -13892 |
chr1 | 7765234 | 7765343 | E082 | -13748 |
chr1 | 7765406 | 7766078 | E082 | -13013 |
chr1 | 7766079 | 7766556 | E082 | -12535 |