| Sequence Name | Change(s) |
|---|---|
| GRCh38.p7 chr 2 | NC_000002.12:g.15991660A>G |
| GRCh37.p13 chr 2 | NC_000002.11:g.16131782A>G |
| Study | Population | Group | Sample # | Ref Allele | Alt Allele |
|---|---|---|---|---|---|
| 1000Genomes | African | Sub | 1322 | A=0.310 | G=0.690 |
| 1000Genomes | American | Sub | 694 | A=0.110 | G=0.890 |
| 1000Genomes | East Asian | Sub | 1008 | A=0.000 | G=1.000 |
| 1000Genomes | Europe | Sub | 1006 | A=0.140 | G=0.860 |
| 1000Genomes | Global | Study-wide | 5008 | A=0.144 | G=0.856 |
| 1000Genomes | South Asian | Sub | 978 | A=0.090 | G=0.910 |
| The Avon Longitudinal Study of Parents and Children | PARENT AND CHILD COHORT | Study-wide | 3854 | A=0.134 | G=0.866 |
| Trans-Omics for Precision Medicine | Global | Study-wide | 29116 | A=0.206 | G=0.793 |
| UK 10K study - Twins | TWIN COHORT | Study-wide | 3708 | A=0.128 | G=0.872 |
| PMID | Title | Author | Journal |
|---|---|---|---|
| 20201924 | Genome-wide association study of alcohol dependence implicates a region on chromosome 11. | Edenberg HJ | Alcohol Clin Exp Res |
| SNP ID | p-value | Traits | Study |
|---|---|---|---|
| rs6706117 | 0.000534 | alcohol dependence | 20201924 |
| Position (v37) | eGene | GeneID | Variant | p-value | TSS | Tissue | |
|---|---|---|---|---|---|---|---|
| There is no eQTL annotation for this SNP | |||||||
| Probe ID | Position | Gene | beta | p-value | |||
|---|---|---|---|---|---|---|---|
| There is no meQTL annotation for this SNP | |||||||
There is no significant Hi-C chromatin interaction data for this SNP.
| Chromosome | Start | End | Region | Distance ( -/+ : Up/Downstream ) |
|---|---|---|---|---|
| chr2 | 16084746 | 16084834 | E067 | -46948 |
| chr2 | 16123917 | 16123980 | E067 | -7802 |
| chr2 | 16124088 | 16125353 | E067 | -6429 |
| chr2 | 16125578 | 16125662 | E067 | -6120 |
| chr2 | 16152713 | 16153599 | E067 | 20931 |
| chr2 | 16154488 | 16154714 | E067 | 22706 |
| chr2 | 16154737 | 16154813 | E067 | 22955 |
| chr2 | 16154935 | 16154985 | E067 | 23153 |
| chr2 | 16155048 | 16155141 | E067 | 23266 |
| chr2 | 16171809 | 16171920 | E067 | 40027 |
| chr2 | 16172010 | 16172196 | E067 | 40228 |
| chr2 | 16177207 | 16177251 | E067 | 45425 |
| chr2 | 16177341 | 16177403 | E067 | 45559 |
| chr2 | 16177881 | 16177949 | E067 | 46099 |
| chr2 | 16178039 | 16178232 | E067 | 46257 |
| chr2 | 16178418 | 16178480 | E067 | 46636 |
| chr2 | 16178651 | 16178746 | E067 | 46869 |
| chr2 | 16178805 | 16179197 | E067 | 47023 |
| chr2 | 16084746 | 16084834 | E068 | -46948 |
| chr2 | 16123917 | 16123980 | E068 | -7802 |
| chr2 | 16125578 | 16125662 | E068 | -6120 |
| chr2 | 16137554 | 16137620 | E068 | 5772 |
| chr2 | 16137779 | 16137855 | E068 | 5997 |
| chr2 | 16152713 | 16153599 | E068 | 20931 |
| chr2 | 16157461 | 16157710 | E068 | 25679 |
| chr2 | 16162860 | 16163018 | E068 | 31078 |
| chr2 | 16163064 | 16163147 | E068 | 31282 |
| chr2 | 16163234 | 16163328 | E068 | 31452 |
| chr2 | 16170218 | 16171285 | E068 | 38436 |
| chr2 | 16171372 | 16171440 | E068 | 39590 |
| chr2 | 16171493 | 16171592 | E068 | 39711 |
| chr2 | 16171611 | 16171785 | E068 | 39829 |
| chr2 | 16178039 | 16178232 | E068 | 46257 |
| chr2 | 16178418 | 16178480 | E068 | 46636 |
| chr2 | 16178651 | 16178746 | E068 | 46869 |
| chr2 | 16084746 | 16084834 | E069 | -46948 |
| chr2 | 16123917 | 16123980 | E069 | -7802 |
| chr2 | 16124088 | 16125353 | E069 | -6429 |
| chr2 | 16125578 | 16125662 | E069 | -6120 |
| chr2 | 16154737 | 16154813 | E069 | 22955 |
| chr2 | 16154935 | 16154985 | E069 | 23153 |
| chr2 | 16155048 | 16155141 | E069 | 23266 |
| chr2 | 16156212 | 16156330 | E069 | 24430 |
| chr2 | 16170218 | 16171285 | E069 | 38436 |
| chr2 | 16171372 | 16171440 | E069 | 39590 |
| chr2 | 16171493 | 16171592 | E069 | 39711 |
| chr2 | 16171611 | 16171785 | E069 | 39829 |
| chr2 | 16171809 | 16171920 | E069 | 40027 |
| chr2 | 16172010 | 16172196 | E069 | 40228 |
| chr2 | 16177881 | 16177949 | E069 | 46099 |
| chr2 | 16178039 | 16178232 | E069 | 46257 |
| chr2 | 16178418 | 16178480 | E069 | 46636 |
| chr2 | 16178651 | 16178746 | E069 | 46869 |
| chr2 | 16178805 | 16179197 | E069 | 47023 |
| chr2 | 16179258 | 16179308 | E069 | 47476 |
| chr2 | 16179334 | 16179391 | E069 | 47552 |
| chr2 | 16120505 | 16121025 | E070 | -10757 |
| chr2 | 16122485 | 16122972 | E070 | -8810 |
| chr2 | 16123073 | 16123174 | E070 | -8608 |
| chr2 | 16123917 | 16123980 | E070 | -7802 |
| chr2 | 16126024 | 16126074 | E070 | -5708 |
| chr2 | 16126253 | 16126403 | E070 | -5379 |
| chr2 | 16137328 | 16137380 | E070 | 5546 |
| chr2 | 16137554 | 16137620 | E070 | 5772 |
| chr2 | 16137779 | 16137855 | E070 | 5997 |
| chr2 | 16140811 | 16140861 | E070 | 9029 |
| chr2 | 16140959 | 16141072 | E070 | 9177 |
| chr2 | 16152713 | 16153599 | E070 | 20931 |
| chr2 | 16154488 | 16154714 | E070 | 22706 |
| chr2 | 16154737 | 16154813 | E070 | 22955 |
| chr2 | 16154935 | 16154985 | E070 | 23153 |
| chr2 | 16155048 | 16155141 | E070 | 23266 |
| chr2 | 16159875 | 16159925 | E070 | 28093 |
| chr2 | 16160548 | 16160907 | E070 | 28766 |
| chr2 | 16162860 | 16163018 | E070 | 31078 |
| chr2 | 16163064 | 16163147 | E070 | 31282 |
| chr2 | 16163234 | 16163328 | E070 | 31452 |
| chr2 | 16163739 | 16163949 | E070 | 31957 |
| chr2 | 16171372 | 16171440 | E070 | 39590 |
| chr2 | 16171493 | 16171592 | E070 | 39711 |
| chr2 | 16171611 | 16171785 | E070 | 39829 |
| chr2 | 16171809 | 16171920 | E070 | 40027 |
| chr2 | 16172010 | 16172196 | E070 | 40228 |
| chr2 | 16178418 | 16178480 | E070 | 46636 |
| chr2 | 16178651 | 16178746 | E070 | 46869 |
| chr2 | 16178805 | 16179197 | E070 | 47023 |
| chr2 | 16179258 | 16179308 | E070 | 47476 |
| chr2 | 16179334 | 16179391 | E070 | 47552 |
| chr2 | 16122485 | 16122972 | E071 | -8810 |
| chr2 | 16123917 | 16123980 | E071 | -7802 |
| chr2 | 16124088 | 16125353 | E071 | -6429 |
| chr2 | 16125578 | 16125662 | E071 | -6120 |
| chr2 | 16137554 | 16137620 | E071 | 5772 |
| chr2 | 16137779 | 16137855 | E071 | 5997 |
| chr2 | 16146042 | 16147066 | E071 | 14260 |
| chr2 | 16154935 | 16154985 | E071 | 23153 |
| chr2 | 16159875 | 16159925 | E071 | 28093 |
| chr2 | 16170218 | 16171285 | E071 | 38436 |
| chr2 | 16171372 | 16171440 | E071 | 39590 |
| chr2 | 16171493 | 16171592 | E071 | 39711 |
| chr2 | 16171611 | 16171785 | E071 | 39829 |
| chr2 | 16171809 | 16171920 | E071 | 40027 |
| chr2 | 16172010 | 16172196 | E071 | 40228 |
| chr2 | 16177881 | 16177949 | E071 | 46099 |
| chr2 | 16178039 | 16178232 | E071 | 46257 |
| chr2 | 16178418 | 16178480 | E071 | 46636 |
| chr2 | 16178651 | 16178746 | E071 | 46869 |
| chr2 | 16178805 | 16179197 | E071 | 47023 |
| chr2 | 16179258 | 16179308 | E071 | 47476 |
| chr2 | 16179334 | 16179391 | E071 | 47552 |
| chr2 | 16084746 | 16084834 | E072 | -46948 |
| chr2 | 16123917 | 16123980 | E072 | -7802 |
| chr2 | 16124088 | 16125353 | E072 | -6429 |
| chr2 | 16125578 | 16125662 | E072 | -6120 |
| chr2 | 16126024 | 16126074 | E072 | -5708 |
| chr2 | 16137328 | 16137380 | E072 | 5546 |
| chr2 | 16137554 | 16137620 | E072 | 5772 |
| chr2 | 16137779 | 16137855 | E072 | 5997 |
| chr2 | 16152713 | 16153599 | E072 | 20931 |
| chr2 | 16154737 | 16154813 | E072 | 22955 |
| chr2 | 16154935 | 16154985 | E072 | 23153 |
| chr2 | 16155048 | 16155141 | E072 | 23266 |
| chr2 | 16160548 | 16160907 | E072 | 28766 |
| chr2 | 16170218 | 16171285 | E072 | 38436 |
| chr2 | 16171372 | 16171440 | E072 | 39590 |
| chr2 | 16171493 | 16171592 | E072 | 39711 |
| chr2 | 16171611 | 16171785 | E072 | 39829 |
| chr2 | 16171809 | 16171920 | E072 | 40027 |
| chr2 | 16172010 | 16172196 | E072 | 40228 |
| chr2 | 16174322 | 16174448 | E072 | 42540 |
| chr2 | 16174792 | 16174963 | E072 | 43010 |
| chr2 | 16177881 | 16177949 | E072 | 46099 |
| chr2 | 16178039 | 16178232 | E072 | 46257 |
| chr2 | 16178418 | 16178480 | E072 | 46636 |
| chr2 | 16178651 | 16178746 | E072 | 46869 |
| chr2 | 16178805 | 16179197 | E072 | 47023 |
| chr2 | 16123917 | 16123980 | E073 | -7802 |
| chr2 | 16124088 | 16125353 | E073 | -6429 |
| chr2 | 16125578 | 16125662 | E073 | -6120 |
| chr2 | 16084746 | 16084834 | E074 | -46948 |
| chr2 | 16123917 | 16123980 | E074 | -7802 |
| chr2 | 16124088 | 16125353 | E074 | -6429 |
| chr2 | 16125578 | 16125662 | E074 | -6120 |
| chr2 | 16137554 | 16137620 | E074 | 5772 |
| chr2 | 16137779 | 16137855 | E074 | 5997 |
| chr2 | 16146042 | 16147066 | E074 | 14260 |
| chr2 | 16152713 | 16153599 | E074 | 20931 |
| chr2 | 16154488 | 16154714 | E074 | 22706 |
| chr2 | 16154737 | 16154813 | E074 | 22955 |
| chr2 | 16154935 | 16154985 | E074 | 23153 |
| chr2 | 16155048 | 16155141 | E074 | 23266 |
| chr2 | 16170218 | 16171285 | E074 | 38436 |
| chr2 | 16171493 | 16171592 | E074 | 39711 |
| chr2 | 16171611 | 16171785 | E074 | 39829 |
| chr2 | 16171809 | 16171920 | E074 | 40027 |
| chr2 | 16172010 | 16172196 | E074 | 40228 |
| chr2 | 16174322 | 16174448 | E074 | 42540 |
| chr2 | 16174792 | 16174963 | E074 | 43010 |
| chr2 | 16177881 | 16177949 | E074 | 46099 |
| chr2 | 16178039 | 16178232 | E074 | 46257 |
| chr2 | 16178418 | 16178480 | E074 | 46636 |
| chr2 | 16179258 | 16179308 | E074 | 47476 |
| chr2 | 16179334 | 16179391 | E074 | 47552 |
| chr2 | 16086394 | 16086444 | E081 | -45338 |
| chr2 | 16087650 | 16087799 | E081 | -43983 |
| chr2 | 16122485 | 16122972 | E081 | -8810 |
| chr2 | 16123073 | 16123174 | E081 | -8608 |
| chr2 | 16123917 | 16123980 | E081 | -7802 |
| chr2 | 16124088 | 16125353 | E081 | -6429 |
| chr2 | 16125578 | 16125662 | E081 | -6120 |
| chr2 | 16126024 | 16126074 | E081 | -5708 |
| chr2 | 16152713 | 16153599 | E081 | 20931 |
| chr2 | 16154488 | 16154714 | E081 | 22706 |
| chr2 | 16154737 | 16154813 | E081 | 22955 |
| chr2 | 16154935 | 16154985 | E081 | 23153 |
| chr2 | 16155048 | 16155141 | E081 | 23266 |
| chr2 | 16156212 | 16156330 | E081 | 24430 |
| chr2 | 16170218 | 16171285 | E081 | 38436 |
| chr2 | 16171372 | 16171440 | E081 | 39590 |
| chr2 | 16171493 | 16171592 | E081 | 39711 |
| chr2 | 16171611 | 16171785 | E081 | 39829 |
| chr2 | 16178805 | 16179197 | E081 | 47023 |
| chr2 | 16179258 | 16179308 | E081 | 47476 |
| chr2 | 16179334 | 16179391 | E081 | 47552 |
| chr2 | 16179473 | 16179558 | E081 | 47691 |
| chr2 | 16179845 | 16180101 | E081 | 48063 |
| chr2 | 16180546 | 16181036 | E081 | 48764 |
| chr2 | 16114245 | 16114334 | E082 | -17448 |
| chr2 | 16114394 | 16114481 | E082 | -17301 |
| chr2 | 16122485 | 16122972 | E082 | -8810 |
| chr2 | 16123073 | 16123174 | E082 | -8608 |
| chr2 | 16123917 | 16123980 | E082 | -7802 |
| chr2 | 16124088 | 16125353 | E082 | -6429 |
| chr2 | 16125578 | 16125662 | E082 | -6120 |
| chr2 | 16126024 | 16126074 | E082 | -5708 |
| chr2 | 16126253 | 16126403 | E082 | -5379 |
| chr2 | 16126431 | 16126871 | E082 | -4911 |
| chr2 | 16140811 | 16140861 | E082 | 9029 |
| chr2 | 16140959 | 16141072 | E082 | 9177 |
| chr2 | 16152713 | 16153599 | E082 | 20931 |
| chr2 | 16154737 | 16154813 | E082 | 22955 |
| chr2 | 16154935 | 16154985 | E082 | 23153 |
| chr2 | 16162860 | 16163018 | E082 | 31078 |
| chr2 | 16163064 | 16163147 | E082 | 31282 |
| chr2 | 16163234 | 16163328 | E082 | 31452 |
| chr2 | 16171372 | 16171440 | E082 | 39590 |
| chr2 | 16171493 | 16171592 | E082 | 39711 |
| chr2 | 16171611 | 16171785 | E082 | 39829 |
| chr2 | 16171809 | 16171920 | E082 | 40027 |
| chr2 | 16172010 | 16172196 | E082 | 40228 |
| chr2 | 16177881 | 16177949 | E082 | 46099 |
| chr2 | 16178805 | 16179197 | E082 | 47023 |
| chr2 | 16179258 | 16179308 | E082 | 47476 |
| chr2 | 16179334 | 16179391 | E082 | 47552 |
| chr2 | 16180546 | 16181036 | E082 | 48764 |
| Chromosome | Start | End | Region | Distance(-/+:Up/Downstream) |
|---|---|---|---|---|
| chr2 | 16082710 | 16082772 | E067 | -49010 |
| chr2 | 16082868 | 16083297 | E067 | -48485 |
| chr2 | 16082710 | 16082772 | E068 | -49010 |
| chr2 | 16082868 | 16083297 | E068 | -48485 |
| chr2 | 16082710 | 16082772 | E069 | -49010 |
| chr2 | 16082868 | 16083297 | E069 | -48485 |
| chr2 | 16082710 | 16082772 | E070 | -49010 |
| chr2 | 16082710 | 16082772 | E071 | -49010 |
| chr2 | 16082710 | 16082772 | E072 | -49010 |
| chr2 | 16082868 | 16083297 | E072 | -48485 |
| chr2 | 16082710 | 16082772 | E073 | -49010 |
| chr2 | 16082868 | 16083297 | E073 | -48485 |
| chr2 | 16082710 | 16082772 | E074 | -49010 |
| chr2 | 16082868 | 16083297 | E074 | -48485 |
| chr2 | 16082710 | 16082772 | E081 | -49010 |
| chr2 | 16082868 | 16083297 | E081 | -48485 |
| chr2 | 16082710 | 16082772 | E082 | -49010 |
| chr2 | 16082868 | 16083297 | E082 | -48485 |