rs671101

Homo sapiens
A>G
None
Check p-value
SNV (Single Nucleotide Variation)
G=0270 (8094/29916,GnomAD)
G=0294 (8566/29118,TOPMED)
G=0364 (1821/5008,1000G)
G=0237 (915/3854,ALSPAC)
G=0224 (829/3708,TWINSUK)
chr1:31870497 (GRCh38.p7) (1p35.2)
AD
GWASdb2
1   publication(s)
See rs on genome
0 Promoter around

Genomic Coordinates

Sequence Name Change(s)
GRCh38.p7 chr 1NC_000001.11:g.31870497A>G
GRCh37.p13 chr 1NC_000001.10:g.32336098A>G

Population Frequency

Study Population Group Sample # Ref Allele Alt Allele
1000GenomesAfricanSub1322A=0.601G=0.399
1000GenomesAmericanSub694A=0.680G=0.320
1000GenomesEast AsianSub1008A=0.601G=0.399
1000GenomesEuropeSub1006A=0.786G=0.214
1000GenomesGlobalStudy-wide5008A=0.636G=0.364
1000GenomesSouth AsianSub978A=0.540G=0.460
The Avon Longitudinal Study of Parents and ChildrenPARENT AND CHILD COHORTStudy-wide3854A=0.763G=0.237
The Genome Aggregation DatabaseAfricanSub8698A=0.635G=0.365
The Genome Aggregation DatabaseAmericanSub838A=0.780G=0.220
The Genome Aggregation DatabaseEast AsianSub1616A=0.618G=0.382
The Genome Aggregation DatabaseEuropeSub18462A=0.781G=0.218
The Genome Aggregation DatabaseGlobalStudy-wide29916A=0.729G=0.270
The Genome Aggregation DatabaseOtherSub302A=0.730G=0.270
Trans-Omics for Precision MedicineGlobalStudy-wide29118A=0.705G=0.294
UK 10K study - TwinsTWIN COHORTStudy-wide3708A=0.776G=0.224
PMID Title Author Journal
23953852Genome-wide association studies of maximum number of drinks.Pan YJ Psychiatr Res

P-Value

SNP ID p-value Traits Study
rs6711017.83E-05alcohol consumption23953852

eQTL of rs671101 in Brain tissues (GTEx Analysis Release V7)

Position (v37) eGene GeneID Variant p-value TSS Tissue
There is no eQTL annotation for this SNP

meQTL of rs671101 in Fetal Brain

Probe ID Position Gene beta p-value
There is no meQTL annotation for this SNP

Genomic View

Chromatin Interaction

There is no significant Hi-C chromatin interaction data for this SNP.

Enhancer Annotation (GRCh37.p13)

Chromosome Start End Region Distance ( -/+ : Up/Downstream )
chr13229896432299056E067-37042
chr13230540232305519E067-30579
chr13230558832305764E067-30334
chr13230850932308912E067-27186
chr13230897132309166E067-26932
chr13230917532309447E067-26651
chr13230964832309736E067-26362
chr13232625232326630E067-9468
chr13237041232370729E06734314
chr13237128432371398E06735186
chr13237857832378622E06742480
chr13237864332378693E06742545
chr13237960432379667E06743506
chr13238010032380170E06744002
chr13230515632305209E068-30889
chr13230540232305519E068-30579
chr13230558832305764E068-30334
chr13230604832306127E068-29971
chr13230792432307978E068-28120
chr13230964832309736E068-26362
chr13237663432376863E06840536
chr13237779032377851E06841692
chr13237794732378272E06841849
chr13237960432379667E06843506
chr13238010032380170E06844002
chr13229827632298326E069-37772
chr13229833132298382E069-37716
chr13229838532298492E069-37606
chr13229865632298858E069-37240
chr13229896432299056E069-37042
chr13230540232305519E069-30579
chr13230558832305764E069-30334
chr13230604832306127E069-29971
chr13230792432307978E069-28120
chr13230850932308912E069-27186
chr13230897132309166E069-26932
chr13230917532309447E069-26651
chr13230964832309736E069-26362
chr13232625232326630E069-9468
chr13237663432376863E06940536
chr13237779032377851E06941692
chr13237794732378272E06941849
chr13237848432378545E06942386
chr13237857832378622E06942480
chr13237960432379667E06943506
chr13230850932308912E070-27186
chr13230897132309166E070-26932
chr13230917532309447E070-26651
chr13228849032288759E071-47339
chr13229806132298243E071-37855
chr13229827632298326E071-37772
chr13229833132298382E071-37716
chr13229838532298492E071-37606
chr13229865632298858E071-37240
chr13229896432299056E071-37042
chr13230540232305519E071-30579
chr13230558832305764E071-30334
chr13230604832306127E071-29971
chr13230792432307978E071-28120
chr13230850932308912E071-27186
chr13230897132309166E071-26932
chr13230964832309736E071-26362
chr13231114132311344E071-24754
chr13231139432311444E071-24654
chr13232625232326630E071-9468
chr13233208332332288E071-3810
chr13233234932332389E071-3709
chr13236949932369666E07133401
chr13236979432369887E07133696
chr13237663432376863E07140536
chr13237779032377851E07141692
chr13237794732378272E07141849
chr13237848432378545E07142386
chr13237857832378622E07142480
chr13237864332378693E07142545
chr13237874632378820E07142648
chr13237960432379667E07143506
chr13229806132298243E072-37855
chr13229827632298326E072-37772
chr13229833132298382E072-37716
chr13229838532298492E072-37606
chr13229896432299056E072-37042
chr13230540232305519E072-30579
chr13230558832305764E072-30334
chr13230604832306127E072-29971
chr13230792432307978E072-28120
chr13230850932308912E072-27186
chr13230897132309166E072-26932
chr13230917532309447E072-26651
chr13230964832309736E072-26362
chr13231114132311344E072-24754
chr13231139432311444E072-24654
chr13232541432325583E072-10515
chr13232625232326630E072-9468
chr13233208332332288E072-3810
chr13233234932332389E072-3709
chr13233240332332654E072-3444
chr13234588032346059E0729782
chr13234612632346176E07210028
chr13234631132346377E07210213
chr13234664932347484E07210551
chr13237960432379667E07243506
chr13230540232305519E073-30579
chr13230558832305764E073-30334
chr13230792432307978E073-28120
chr13230850932308912E073-27186
chr13230897132309166E073-26932
chr13230917532309447E073-26651
chr13229806132298243E074-37855
chr13229827632298326E074-37772
chr13229833132298382E074-37716
chr13229838532298492E074-37606
chr13229865632298858E074-37240
chr13229896432299056E074-37042
chr13230515632305209E074-30889
chr13230540232305519E074-30579
chr13230558832305764E074-30334
chr13230604832306127E074-29971
chr13230792432307978E074-28120
chr13230850932308912E074-27186
chr13230897132309166E074-26932
chr13230917532309447E074-26651
chr13230964832309736E074-26362
chr13232625232326630E074-9468
chr13237779032377851E07441692
chr13237960432379667E07443506
chr13238010032380170E07444002
chr13230259132302683E081-33415
chr13230286832303715E081-32383
chr13230850932308912E081-27186
chr13233208332332288E081-3810
chr13233234932332389E081-3709
chr13233240332332654E081-3444
chr13233356932333721E081-2377
chr13233480632334968E081-1130
chr13233502132335378E081-720
chr13233541532335455E081-643
chr13233583432335954E081-144
chr13233599532336039E081-59
chr13233608932336196E0810
chr13234664932347484E08110551
chr13229865632298858E082-37240
chr13229896432299056E082-37042
chr13230286832303715E082-32383
chr13234588032346059E0829782
chr13234612632346176E08210028
chr13234631132346377E08210213