rs6763281

Homo sapiens
G>T
None
Check p-value
SNV (Single Nucleotide Variation)
T=0128 (3845/29906,GnomAD)
T=0161 (4701/29118,TOPMED)
T=0135 (676/5008,1000G)
T=0103 (396/3854,ALSPAC)
T=0106 (394/3708,TWINSUK)
chr3:164870417 (GRCh38.p7) (3q26.1)
AD
GWASdb2
1   publication(s)
See rs on genome
0 Enhancer around
0 Promoter around

Genomic Coordinates

Sequence Name Change(s)
GRCh38.p7 chr 3NC_000003.12:g.164870417G>T
GRCh37.p13 chr 3NC_000003.11:g.164588205G>T

Population Frequency

Study Population Group Sample # Ref Allele Alt Allele
1000GenomesAfricanSub1322G=0.769T=0.231
1000GenomesAmericanSub694G=0.920T=0.080
1000GenomesEast AsianSub1008G=0.905T=0.095
1000GenomesEuropeSub1006G=0.907T=0.093
1000GenomesGlobalStudy-wide5008G=0.865T=0.135
1000GenomesSouth AsianSub978G=0.870T=0.130
The Avon Longitudinal Study of Parents and ChildrenPARENT AND CHILD COHORTStudy-wide3854G=0.897T=0.103
The Genome Aggregation DatabaseAfricanSub8696G=0.772T=0.228
The Genome Aggregation DatabaseAmericanSub838G=0.940T=0.060
The Genome Aggregation DatabaseEast AsianSub1618G=0.900T=0.100
The Genome Aggregation DatabaseEuropeSub18452G=0.912T=0.088
The Genome Aggregation DatabaseGlobalStudy-wide29906G=0.871T=0.128
The Genome Aggregation DatabaseOtherSub302G=0.910T=0.090
Trans-Omics for Precision MedicineGlobalStudy-wide29118G=0.838T=0.161
UK 10K study - TwinsTWIN COHORTStudy-wide3708G=0.894T=0.106
PMID Title Author Journal
24962325Genome-wide survival analysis of age at onset of alcohol dependence in extended high-risk COGA families.Kapoor MDrug Alcohol Depend

P-Value

SNP ID p-value Traits Study
rs67632819.02E-09alcohol dependence (age at onset)24962325

eQTL of rs6763281 in Brain tissues (GTEx Analysis Release V7)

Position (v37) eGene GeneID Variant p-value TSS Tissue
There is no eQTL annotation for this SNP

meQTL of rs6763281 in Fetal Brain

Probe ID Position Gene beta p-value
There is no meQTL annotation for this SNP

Genomic View

Chromatin Interaction

There is no significant Hi-C chromatin interaction data for this SNP.