rs6763627

Homo sapiens
C>G / C>T
None
Check p-value
SNV (Single Nucleotide Variation)
C==0333 (9981/29928,GnomAD)
C==0313 (9134/29118,TOPMED)
C==0229 (1145/5008,1000G)
chr3:133543723 (GRCh38.p7) (3q22.1)
AD
GWASdb2
1   publication(s)
See rs on genome
26 Enhancers around
12 Promoters around

Genomic Coordinates

Sequence Name Change(s)
GRCh38.p7 chr 3NC_000003.12:g.133543723C>G
GRCh38.p7 chr 3NC_000003.12:g.133543723C>T
GRCh37.p13 chr 3NC_000003.11:g.133262567C>G
GRCh37.p13 chr 3NC_000003.11:g.133262567C>T

Population Frequency

Study Population Group Sample # Ref Allele Alt Allele
1000GenomesAfricanSub1322C=0.259G=0.741
1000GenomesAmericanSub694C=0.270G=0.730
1000GenomesEast AsianSub1008C=0.132G=0.868
1000GenomesEuropeSub1006C=0.318G=0.682
1000GenomesGlobalStudy-wide5008C=0.229G=0.771
1000GenomesSouth AsianSub978C=0.170G=0.830
The Genome Aggregation DatabaseAfricanSub8712C=0.281G=0.719
The Genome Aggregation DatabaseAmericanSub838C=0.230G=0.77,
The Genome Aggregation DatabaseEast AsianSub1618C=0.123G=0.877
The Genome Aggregation DatabaseEuropeSub18458C=0.380G=0.619
The Genome Aggregation DatabaseGlobalStudy-wide29928C=0.333G=0.666
The Genome Aggregation DatabaseOtherSub302C=0.390G=0.61,
Trans-Omics for Precision MedicineGlobalStudy-wide29118C=0.313G=0.686
PMID Title Author Journal
21665994Genome-wide association study identifies two loci strongly affecting transferrin glycosylation.Kutalik ZHum Mol Genet

P-Value

SNP ID p-value Traits Study
rs67636274.71E-07alcohol consumption21665994

eQTL of rs6763627 in Brain tissues (GTEx Analysis Release V7)

Position (v37) eGene GeneID Variant p-value TSS Tissue
There is no eQTL annotation for this SNP

meQTL of rs6763627 in Fetal Brain

Probe ID Position Gene beta p-value
There is no meQTL annotation for this SNP

Genomic View

Chromatin Interaction

There is no significant Hi-C chromatin interaction data for this SNP.

Enhancer Annotation (GRCh37.p13)

Chromosome Start End Region Distance ( -/+ : Up/Downstream )
chr3133254911133255817E067-6628
chr3133297382133297726E06734937
chr3133254911133255817E068-6628
chr3133254911133255817E069-6628
chr3133296654133296726E06934209
chr3133296755133296862E06934310
chr3133297034133297084E06934589
chr3133297382133297726E06934937
chr3133254911133255817E070-6628
chr3133297382133297726E07034937
chr3133297382133297726E07134937
chr3133289963133290140E07227518
chr3133297382133297726E07234937
chr3133296654133296726E07334209
chr3133296755133296862E07334310
chr3133297034133297084E07334589
chr3133297382133297726E07334937
chr3133254911133255817E074-6628
chr3133296654133296726E07434209
chr3133296755133296862E07434310
chr3133297034133297084E07434589
chr3133297382133297726E07434937
chr3133296755133296862E08134310
chr3133297034133297084E08134589
chr3133297382133297726E08134937
chr3133297382133297726E08234937










Promoter Annotation (GRCh37.p13)

Chromosome Start End Region Distance(-/+:Up/Downstream)
chr3133291220133294288E06728775
chr3133291220133294288E06828775
chr3133291220133294288E06928775
chr3133291220133294288E07028775
chr3133294433133294485E07031988
chr3133291220133294288E07128775
chr3133294433133294485E07131988
chr3133291220133294288E07228775
chr3133291220133294288E07328775
chr3133291220133294288E07428775
chr3133291220133294288E08228775
chr3133294433133294485E08231988