rs6791103

Homo sapiens
A>C
None
Check p-value
SNV (Single Nucleotide Variation)
C=0127 (3821/29954,GnomAD)
C=0159 (4654/29118,TOPMED)
C=0134 (672/5008,1000G)
C=0104 (399/3854,ALSPAC)
C=0106 (392/3708,TWINSUK)
chr3:164867787 (GRCh38.p7) (3q26.1)
AD
GWASdb2
1   publication(s)
See rs on genome
0 Enhancer around
0 Promoter around

Genomic Coordinates

Sequence Name Change(s)
GRCh38.p7 chr 3NC_000003.12:g.164867787A>C
GRCh37.p13 chr 3NC_000003.11:g.164585575A>C

Population Frequency

Study Population Group Sample # Ref Allele Alt Allele
1000GenomesAfricanSub1322A=0.772C=0.228
1000GenomesAmericanSub694A=0.930C=0.070
1000GenomesEast AsianSub1008A=0.906C=0.094
1000GenomesEuropeSub1006A=0.907C=0.093
1000GenomesGlobalStudy-wide5008A=0.866C=0.134
1000GenomesSouth AsianSub978A=0.870C=0.130
The Avon Longitudinal Study of Parents and ChildrenPARENT AND CHILD COHORTStudy-wide3854A=0.896C=0.104
The Genome Aggregation DatabaseAfricanSub8714A=0.776C=0.224
The Genome Aggregation DatabaseAmericanSub836A=0.940C=0.060
The Genome Aggregation DatabaseEast AsianSub1616A=0.899C=0.101
The Genome Aggregation DatabaseEuropeSub18486A=0.911C=0.088
The Genome Aggregation DatabaseGlobalStudy-wide29954A=0.872C=0.127
The Genome Aggregation DatabaseOtherSub302A=0.910C=0.090
Trans-Omics for Precision MedicineGlobalStudy-wide29118A=0.840C=0.159
UK 10K study - TwinsTWIN COHORTStudy-wide3708A=0.894C=0.106
PMID Title Author Journal
24962325Genome-wide survival analysis of age at onset of alcohol dependence in extended high-risk COGA families.Kapoor MDrug Alcohol Depend

P-Value

SNP ID p-value Traits Study
rs67911038.85E-09alcohol dependence (age at onset)24962325

eQTL of rs6791103 in Brain tissues (GTEx Analysis Release V7)

Position (v37) eGene GeneID Variant p-value TSS Tissue
There is no eQTL annotation for this SNP

meQTL of rs6791103 in Fetal Brain

Probe ID Position Gene beta p-value
There is no meQTL annotation for this SNP

Genomic View

Chromatin Interaction

There is no significant Hi-C chromatin interaction data for this SNP.