rs6810410

Homo sapiens
T>C
None
Check p-value
SNV (Single Nucleotide Variation)
T==0385 (11526/29874,GnomAD)
T==0366 (10684/29118,TOPMED)
T==0299 (1499/5008,1000G)
T==0391 (1507/3854,ALSPAC)
T==0396 (1469/3708,TWINSUK)
chr4:67443848 (GRCh38.p7) (4q13.2)
AD
GWASdb2
1   publication(s)
See rs on genome
28 Enhancers around
1 Promoter around

Genomic Coordinates

Sequence Name Change(s)
GRCh38.p7 chr 4NC_000004.12:g.67443848T>C
GRCh37.p13 chr 4NC_000004.11:g.68309566T>C

Population Frequency

Study Population Group Sample # Ref Allele Alt Allele
1000GenomesAfricanSub1322T=0.381C=0.619
1000GenomesAmericanSub694T=0.240C=0.760
1000GenomesEast AsianSub1008T=0.174C=0.826
1000GenomesEuropeSub1006T=0.375C=0.625
1000GenomesGlobalStudy-wide5008T=0.299C=0.701
1000GenomesSouth AsianSub978T=0.280C=0.720
The Avon Longitudinal Study of Parents and ChildrenPARENT AND CHILD COHORTStudy-wide3854T=0.391C=0.609
The Genome Aggregation DatabaseAfricanSub8696T=0.365C=0.635
The Genome Aggregation DatabaseAmericanSub834T=0.240C=0.760
The Genome Aggregation DatabaseEast AsianSub1620T=0.175C=0.825
The Genome Aggregation DatabaseEuropeSub18424T=0.421C=0.578
The Genome Aggregation DatabaseGlobalStudy-wide29874T=0.385C=0.614
The Genome Aggregation DatabaseOtherSub300T=0.330C=0.670
Trans-Omics for Precision MedicineGlobalStudy-wide29118T=0.366C=0.633
UK 10K study - TwinsTWIN COHORTStudy-wide3708T=0.396C=0.604
PMID Title Author Journal
20201924Genome-wide association study of alcohol dependence implicates a region on chromosome 11.Edenberg HJAlcohol Clin Exp Res

P-Value

SNP ID p-value Traits Study
rs68104100.000357alcohol dependence20201924

eQTL of rs6810410 in Brain tissues (GTEx Analysis Release V7)

Position (v37) eGene GeneID Variant p-value TSS Tissue
There is no eQTL annotation for this SNP

meQTL of rs6810410 in Fetal Brain

Probe ID Position Gene beta p-value
There is no meQTL annotation for this SNP

Genomic View

Chromatin Interaction

There is no significant Hi-C chromatin interaction data for this SNP.

Enhancer Annotation (GRCh37.p13)

Chromosome Start End Region Distance ( -/+ : Up/Downstream )
chr46830252468302708E067-6858
chr46830369068303910E067-5656
chr46830397768304613E067-4953
chr46833071468330762E06721148
chr46833127268331554E06721706
chr46833127268331554E06821706
chr46830252468302708E069-6858
chr46830369068303910E069-5656
chr46830397768304613E069-4953
chr46833071468330762E06921148
chr46833127268331554E06921706
chr46830252468302708E071-6858
chr46833127268331554E07121706
chr46830369068303910E072-5656
chr46830397768304613E072-4953
chr46833071468330762E07221148
chr46833127268331554E07221706
chr46833071468330762E07321148
chr46830252468302708E074-6858
chr46830369068303910E074-5656
chr46830397768304613E074-4953
chr46833127268331554E07421706
chr46833162368331730E07422057
chr46826249068262551E081-47015
chr46826808668268203E081-41363
chr46826260468263390E082-46176
chr46826759168267949E082-41617
chr46826808668268203E082-41363









Promoter Annotation (GRCh37.p13)

Chromosome Start End Region Distance(-/+:Up/Downstream)
chr46831200668312191E0822440