SNP Detail Info-rs6811255

Organism: Homo sapiens

Alleles: G>T

Gene : Feature

None

p-value: Check p-value

Variation Type: SNV (Single Nucleotide Variation)

Frequency:

T=0429 (12836/29894,GnomAD)
T=0446 (13008/29118,TOPMED)
T=0406 (2032/5008,1000G)
T=0459 (1768/3854,ALSPAC)
T=0471 (1745/3708,TWINSUK)

Position: chr4:31792028 (GRCh38.p7) (4p15.1)

Phenotype: AD

Dataset:

GWASdb2

Publications: 1 publication(s)

Genomic View: See rs on genome

Enhancer: 0 Enhancer around

Promoter: 0 Promoter around

Sequence Name	Change(s)
GRCh38.p7 chr 4	NC_000004.12:g.31792028G>T
GRCh37.p13 chr 4	NC_000004.11:g.31793650G>T

Study	Population	Group	Sample #	Ref Allele	Alt Allele
1000Genomes	African	Sub	1322	G=0.670	T=0.330
1000Genomes	American	Sub	694	G=0.490	T=0.510
1000Genomes	East Asian	Sub	1008	G=0.786	T=0.214
1000Genomes	Europe	Sub	1006	G=0.507	T=0.493
1000Genomes	Global	Study-wide	5008	G=0.594	T=0.406
1000Genomes	South Asian	Sub	978	G=0.460	T=0.540
The Avon Longitudinal Study of Parents and Children	PARENT AND CHILD COHORT	Study-wide	3854	G=0.541	T=0.459
The Genome Aggregation Database	African	Sub	8708	G=0.624	T=0.376
The Genome Aggregation Database	American	Sub	832	G=0.520	T=0.480
The Genome Aggregation Database	East Asian	Sub	1594	G=0.792	T=0.208
The Genome Aggregation Database	Europe	Sub	18458	G=0.529	T=0.470
The Genome Aggregation Database	Global	Study-wide	29894	G=0.570	T=0.429
The Genome Aggregation Database	Other	Sub	302	G=0.530	T=0.470
Trans-Omics for Precision Medicine	Global	Study-wide	29118	G=0.553	T=0.446
UK 10K study - Twins	TWIN COHORT	Study-wide	3708	G=0.529	T=0.471

PMID	Title	Author	Journal
20201924	Genome-wide association study of alcohol dependence implicates a region on chromosome 11.	Edenberg HJ	Alcohol Clin Exp Res

SNP ID	p-value	Traits	Study
rs6811255	0.00046	alcohol dependence	20201924

Position (v37)	eGene	GeneID	Variant	p-value	TSS	Tissue
There is no eQTL annotation for this SNP

Probe ID	Position	Gene	beta	p-value
There is no meQTL annotation for this SNP

rs6811255