rs6832907

Homo sapiens
A>G
None
Check p-value
SNV (Single Nucleotide Variation)
G=0074 (2208/29736,GnomAD)
G=0088 (2563/29118,TOPMED)
G=0069 (345/5008,1000G)
G=0037 (144/3854,ALSPAC)
G=0042 (156/3708,TWINSUK)
chr4:153061733 (GRCh38.p7) (4q31.3)
AD
GWASdb2
1   publication(s)
See rs on genome
157 Enhancers around
0 Promoter around

Genomic Coordinates

Sequence Name Change(s)
GRCh38.p7 chr 4NC_000004.12:g.153061733A>G
GRCh37.p13 chr 4NC_000004.11:g.153982885A>G

Population Frequency

Study Population Group Sample # Ref Allele Alt Allele
1000GenomesAfricanSub1322A=0.807G=0.193
1000GenomesAmericanSub694A=0.970G=0.030
1000GenomesEast AsianSub1008A=0.985G=0.015
1000GenomesEuropeSub1006A=0.959G=0.041
1000GenomesGlobalStudy-wide5008A=0.931G=0.069
1000GenomesSouth AsianSub978A=0.980G=0.020
The Avon Longitudinal Study of Parents and ChildrenPARENT AND CHILD COHORTStudy-wide3854A=0.963G=0.037
The Genome Aggregation DatabaseAfricanSub8670A=0.842G=0.158
The Genome Aggregation DatabaseAmericanSub828A=0.980G=0.020
The Genome Aggregation DatabaseEast AsianSub1620A=0.972G=0.028
The Genome Aggregation DatabaseEuropeSub18316A=0.958G=0.042
The Genome Aggregation DatabaseGlobalStudy-wide29736A=0.925G=0.074
The Genome Aggregation DatabaseOtherSub302A=0.990G=0.010
Trans-Omics for Precision MedicineGlobalStudy-wide29118A=0.912G=0.088
UK 10K study - TwinsTWIN COHORTStudy-wide3708A=0.958G=0.042
PMID Title Author Journal
21314694Genomewide association analysis of symptoms of alcohol dependence in the molecular genetics of schizophrenia (MGS2) control sample.Kendler KSAlcohol Clin Exp Res

P-Value

SNP ID p-value Traits Study
rs68329070.000961alcohol dependence21314694

eQTL of rs6832907 in Brain tissues (GTEx Analysis Release V7)

Position (v37) eGene GeneID Variant p-value TSS Tissue
There is no eQTL annotation for this SNP

meQTL of rs6832907 in Fetal Brain

Probe ID Position Gene beta p-value
There is no meQTL annotation for this SNP

Genomic View

Chromatin Interaction

There is no significant Hi-C chromatin interaction data for this SNP.

Enhancer Annotation (GRCh37.p13)

Chromosome Start End Region Distance ( -/+ : Up/Downstream )
chr4153954441153954663E067-28222
chr4154004470154005113E06721585
chr4154005520154005592E06722635
chr4154005870154006038E06722985
chr4154006208154006788E06723323
chr4154006816154006905E06723931
chr4154007052154007116E06724167
chr4154008307154008485E06725422
chr4154008732154009343E06725847
chr4154010257154010360E06727372
chr4154010628154011670E06727743
chr4154011960154012085E06729075
chr4154004470154005113E06821585
chr4154005520154005592E06822635
chr4154005870154006038E06822985
chr4154006208154006788E06823323
chr4154006816154006905E06823931
chr4154007052154007116E06824167
chr4154008307154008485E06825422
chr4154008732154009343E06825847
chr4154010257154010360E06827372
chr4154010628154011670E06827743
chr4154011960154012085E06829075
chr4154014648154014855E06831763
chr4154015347154015450E06832462
chr4154004231154004300E06921346
chr4154004470154005113E06921585
chr4154005520154005592E06922635
chr4154005870154006038E06922985
chr4154006208154006788E06923323
chr4154006816154006905E06923931
chr4154007052154007116E06924167
chr4154008732154009343E06925847
chr4154010257154010360E06927372
chr4154010628154011670E06927743
chr4154011960154012085E06929075
chr4154012427154012483E06929542
chr4154015347154015450E06932462
chr4154015567154015903E06932682
chr4154015947154016027E06933062
chr4153939918153940140E070-42745
chr4153940422153940551E070-42334
chr4154001069154001493E07018184
chr4154001509154001746E07018624
chr4154001945154002017E07019060
chr4154004470154005113E07021585
chr4154005520154005592E07022635
chr4154005870154006038E07022985
chr4154010257154010360E07027372
chr4154010628154011670E07027743
chr4154011960154012085E07029075
chr4153954441153954663E071-28222
chr4154004231154004300E07121346
chr4154004470154005113E07121585
chr4154005520154005592E07122635
chr4154005870154006038E07122985
chr4154006208154006788E07123323
chr4154006816154006905E07123931
chr4154007052154007116E07124167
chr4154008732154009343E07125847
chr4154010257154010360E07127372
chr4154010628154011670E07127743
chr4154011960154012085E07129075
chr4154014648154014855E07131763
chr4154015347154015450E07132462
chr4154015567154015903E07132682
chr4154015947154016027E07133062
chr4153954441153954663E072-28222
chr4153955218153955276E072-27609
chr4153955366153955467E072-27418
chr4154004470154005113E07221585
chr4154005520154005592E07222635
chr4154005870154006038E07222985
chr4154006208154006788E07223323
chr4154006816154006905E07223931
chr4154007052154007116E07224167
chr4154008732154009343E07225847
chr4154010257154010360E07227372
chr4154010628154011670E07227743
chr4154011960154012085E07229075
chr4154015347154015450E07232462
chr4154015567154015903E07232682
chr4154015947154016027E07233062
chr4154004470154005113E07321585
chr4154005870154006038E07322985
chr4154006208154006788E07323323
chr4154008307154008485E07325422
chr4154008732154009343E07325847
chr4154010257154010360E07327372
chr4154010628154011670E07327743
chr4153954441153954663E074-28222
chr4153993248153993602E07410363
chr4153993632153994299E07410747
chr4154004470154005113E07421585
chr4154005520154005592E07422635
chr4154005870154006038E07422985
chr4154006208154006788E07423323
chr4154006816154006905E07423931
chr4154007052154007116E07424167
chr4154008307154008485E07425422
chr4154008732154009343E07425847
chr4154010257154010360E07427372
chr4154010628154011670E07427743
chr4154011960154012085E07429075
chr4154014648154014855E07431763
chr4154015347154015450E07432462
chr4153939918153940140E081-42745
chr4153940422153940551E081-42334
chr4153940956153941045E081-41840
chr4153941144153941295E081-41590
chr4154001069154001493E08118184
chr4154001509154001746E08118624
chr4154001945154002017E08119060
chr4154002086154002137E08119201
chr4154002244154002423E08119359
chr4154003026154003206E08120141
chr4154003302154003361E08120417
chr4154003525154003772E08120640
chr4154003792154003864E08120907
chr4154003913154003988E08121028
chr4154004231154004300E08121346
chr4154004470154005113E08121585
chr4154005520154005592E08122635
chr4154005870154006038E08122985
chr4154006208154006788E08123323
chr4154006816154006905E08123931
chr4154007052154007116E08124167
chr4154008307154008485E08125422
chr4154008732154009343E08125847
chr4154010257154010360E08127372
chr4154010628154011670E08127743
chr4154011960154012085E08129075
chr4154012427154012483E08129542
chr4154013190154013270E08130305
chr4154013960154014257E08131075
chr4154014504154014573E08131619
chr4154014648154014855E08131763
chr4154015347154015450E08132462
chr4154015567154015903E08132682
chr4154015947154016027E08133062
chr4154019116154019409E08136231
chr4154019677154019892E08136792
chr4154004231154004300E08221346
chr4154005520154005592E08222635
chr4154008732154009343E08225847
chr4154010257154010360E08227372
chr4154010628154011670E08227743
chr4154011960154012085E08229075
chr4154012427154012483E08229542
chr4154013190154013270E08230305
chr4154013960154014257E08231075
chr4154014504154014573E08231619
chr4154014648154014855E08231763
chr4154015347154015450E08232462
chr4154015567154015903E08232682
chr4154019116154019409E08236231
chr4154019677154019892E08236792