SNP Detail Info-rs6910089

Sequence Name	Change(s)
GRCh38.p7 chr 6	NC_000006.12:g.46904248T>C
GRCh37.p13 chr 6	NC_000006.11:g.46871985T>C

Molecule type	Change	Amino acid[Codon]	SO Term
ADGRF5 transcript variant 2	NM_001098518.1:c.	N/A	Intron Variant
ADGRF5 transcript variant 1	NM_015234.4:c.	N/A	Intron Variant
ADGRF5 transcript variant X1	XM_005248892.2:c.	N/A	Intron Variant
ADGRF5 transcript variant X2	XM_005248893.3:c.	N/A	Intron Variant
ADGRF5 transcript variant X3	XM_005248894.3:c.	N/A	Intron Variant
ADGRF5 transcript variant X4	XM_005248895.3:c.	N/A	Intron Variant
ADGRF5 transcript variant X6	XM_011514353.2:c.	N/A	Intron Variant
ADGRF5 transcript variant X11	XM_011514354.2:c.	N/A	Intron Variant
ADGRF5 transcript variant X5	XM_017010418.1:c.	N/A	Intron Variant
ADGRF5 transcript variant X7	XM_017010419.1:c.	N/A	Intron Variant
ADGRF5 transcript variant X8	XM_017010420.1:c.	N/A	Intron Variant
ADGRF5 transcript variant X9	XM_017010421.1:c.	N/A	Intron Variant
ADGRF5 transcript variant X10	XM_017010422.1:c.	N/A	Intron Variant
ADGRF5 transcript variant X12	XM_017010423.1:c.	N/A	Intron Variant
ADGRF5 transcript variant X13	XM_017010424.1:c.	N/A	Intron Variant

Molecule type	Change	Amino acid[Codon]	SO Term
LOC101926962 transcript	NR_110658.1:n.	N/A	Intron Variant

Study	Population	Group	Sample #	Ref Allele	Alt Allele
1000Genomes	African	Sub	1322	T=0.891	C=0.109
1000Genomes	American	Sub	694	T=0.920	C=0.080
1000Genomes	East Asian	Sub	1008	T=1.000	C=0.000
1000Genomes	Europe	Sub	1006	T=0.849	C=0.151
1000Genomes	Global	Study-wide	5008	T=0.920	C=0.080
1000Genomes	South Asian	Sub	978	T=0.950	C=0.050
The Avon Longitudinal Study of Parents and Children	PARENT AND CHILD COHORT	Study-wide	3854	T=0.858	C=0.142
The Genome Aggregation Database	African	Sub	8722	T=0.887	C=0.113
The Genome Aggregation Database	American	Sub	836	T=0.930	C=0.070
The Genome Aggregation Database	East Asian	Sub	1620	T=0.999	C=0.001
The Genome Aggregation Database	Europe	Sub	18494	T=0.885	C=0.115
The Genome Aggregation Database	Global	Study-wide	29974	T=0.893	C=0.107
The Genome Aggregation Database	Other	Sub	302	T=0.880	C=0.120
Trans-Omics for Precision Medicine	Global	Study-wide	29118	T=0.876	C=0.123
UK 10K study - Twins	TWIN COHORT	Study-wide	3708	T=0.845	C=0.155

PMID	Title	Author	Journal
19268276	Genome-wide association study of smoking initiation and current smoking.	Vink JM	Am J Hum Genet

SNP ID	p-value	Traits	Study
rs6910089	0.000613	nicotine smoking	19268276

Position (v37)	eGene	GeneID	Variant	p-value	TSS	Tissue
There is no eQTL annotation for this SNP

Probe ID	Position	Gene	beta	p-value
There is no meQTL annotation for this SNP

Chromosome	Start	End	Region	Distance(-/+:Up/Downstream)
chr6	46888778	46888855	E067	16793
chr6	46888969	46889102	E067	16984
chr6	46889264	46889369	E067	17279
chr6	46889619	46889882	E067	17634
chr6	46888778	46888855	E068	16793
chr6	46888969	46889102	E068	16984
chr6	46889264	46889369	E068	17279
chr6	46888778	46888855	E069	16793
chr6	46888969	46889102	E069	16984
chr6	46889264	46889369	E069	17279
chr6	46888778	46888855	E071	16793
chr6	46888969	46889102	E071	16984
chr6	46889264	46889369	E071	17279
chr6	46888778	46888855	E072	16793
chr6	46888969	46889102	E072	16984
chr6	46889264	46889369	E072	17279
chr6	46889619	46889882	E072	17634
chr6	46888778	46888855	E073	16793
chr6	46888969	46889102	E073	16984
chr6	46889264	46889369	E073	17279

rs6910089