Sequence Name | Change(s) |
---|---|
GRCh38.p7 chr 8 | NC_000008.11:g.57704061G>A |
GRCh37.p13 chr 8 | NC_000008.10:g.58616620G>A |
Study | Population | Group | Sample # | Ref Allele | Alt Allele |
---|---|---|---|---|---|
1000Genomes | African | Sub | 1322 | G=0.207 | A=0.793 |
1000Genomes | American | Sub | 694 | G=0.280 | A=0.720 |
1000Genomes | East Asian | Sub | 1008 | G=0.375 | A=0.625 |
1000Genomes | Europe | Sub | 1006 | G=0.256 | A=0.744 |
1000Genomes | Global | Study-wide | 5008 | G=0.295 | A=0.705 |
1000Genomes | South Asian | Sub | 978 | G=0.380 | A=0.620 |
The Avon Longitudinal Study of Parents and Children | PARENT AND CHILD COHORT | Study-wide | 3854 | G=0.273 | A=0.727 |
The Genome Aggregation Database | African | Sub | 8692 | G=0.232 | A=0.768 |
The Genome Aggregation Database | American | Sub | 836 | G=0.300 | A=0.700 |
The Genome Aggregation Database | East Asian | Sub | 1618 | G=0.405 | A=0.595 |
The Genome Aggregation Database | Europe | Sub | 18462 | G=0.243 | A=0.756 |
The Genome Aggregation Database | Global | Study-wide | 29910 | G=0.250 | A=0.749 |
The Genome Aggregation Database | Other | Sub | 302 | G=0.260 | A=0.740 |
Trans-Omics for Precision Medicine | Global | Study-wide | 29118 | G=0.249 | A=0.751 |
UK 10K study - Twins | TWIN COHORT | Study-wide | 3708 | G=0.258 | A=0.742 |
PMID | Title | Author | Journal |
---|---|---|---|
24277619 | ALDH2 is associated to alcohol dependence and is the major genetic determinant of "daily maximum drinks" in a GWAS study of an isolated rural Chinese sample. | Quillen EE | Am J Med Genet B Neuropsychiatr Genet |
SNP ID | p-value | Traits | Study |
---|---|---|---|
rs7004631 | 0.000382 | alcohol dependence | 24277619 |
Position (v37) | eGene | GeneID | Variant | p-value | TSS | Tissue | |
---|---|---|---|---|---|---|---|
There is no eQTL annotation for this SNP |
Probe ID | Position | Gene | beta | p-value | |||
---|---|---|---|---|---|---|---|
There is no meQTL annotation for this SNP |
There is no significant Hi-C chromatin interaction data for this SNP.
Chromosome | Start | End | Region | Distance ( -/+ : Up/Downstream ) |
---|---|---|---|---|
chr8 | 58661517 | 58661588 | E067 | 44897 |
chr8 | 58661517 | 58661588 | E068 | 44897 |
chr8 | 58661643 | 58661853 | E068 | 45023 |
chr8 | 58617904 | 58617957 | E069 | 1284 |
chr8 | 58617992 | 58618103 | E069 | 1372 |
chr8 | 58618157 | 58618709 | E069 | 1537 |
chr8 | 58661517 | 58661588 | E069 | 44897 |
chr8 | 58661643 | 58661853 | E069 | 45023 |
chr8 | 58614402 | 58616297 | E070 | -323 |
chr8 | 58614402 | 58616297 | E071 | -323 |
chr8 | 58616373 | 58616423 | E071 | -197 |
chr8 | 58617904 | 58617957 | E071 | 1284 |
chr8 | 58617992 | 58618103 | E071 | 1372 |
chr8 | 58618157 | 58618709 | E071 | 1537 |
chr8 | 58661517 | 58661588 | E073 | 44897 |
chr8 | 58661643 | 58661853 | E073 | 45023 |
chr8 | 58614402 | 58616297 | E074 | -323 |
chr8 | 58661643 | 58661853 | E074 | 45023 |
chr8 | 58589255 | 58589435 | E081 | -27185 |
chr8 | 58606357 | 58606674 | E081 | -9946 |
chr8 | 58614188 | 58614334 | E081 | -2286 |
chr8 | 58614402 | 58616297 | E081 | -323 |
chr8 | 58617603 | 58617770 | E081 | 983 |
chr8 | 58617904 | 58617957 | E081 | 1284 |
chr8 | 58617992 | 58618103 | E081 | 1372 |
chr8 | 58618157 | 58618709 | E081 | 1537 |
chr8 | 58618799 | 58619021 | E081 | 2179 |
chr8 | 58623641 | 58623748 | E081 | 7021 |
chr8 | 58623827 | 58624008 | E081 | 7207 |
chr8 | 58624064 | 58624168 | E081 | 7444 |
chr8 | 58634651 | 58635215 | E081 | 18031 |
chr8 | 58661517 | 58661588 | E081 | 44897 |
chr8 | 58661643 | 58661853 | E081 | 45023 |
chr8 | 58663472 | 58664136 | E081 | 46852 |
chr8 | 58614402 | 58616297 | E082 | -323 |
chr8 | 58617904 | 58617957 | E082 | 1284 |
chr8 | 58617992 | 58618103 | E082 | 1372 |
chr8 | 58618157 | 58618709 | E082 | 1537 |
chr8 | 58618799 | 58619021 | E082 | 2179 |
chr8 | 58624064 | 58624168 | E082 | 7444 |
chr8 | 58624702 | 58624762 | E082 | 8082 |
chr8 | 58661517 | 58661588 | E082 | 44897 |
chr8 | 58661643 | 58661853 | E082 | 45023 |
Chromosome | Start | End | Region | Distance(-/+:Up/Downstream) |
---|---|---|---|---|
chr8 | 58660414 | 58661442 | E067 | 43794 |
chr8 | 58660414 | 58661442 | E068 | 43794 |
chr8 | 58660414 | 58661442 | E069 | 43794 |
chr8 | 58657853 | 58658385 | E071 | 41233 |
chr8 | 58660414 | 58661442 | E071 | 43794 |
chr8 | 58660414 | 58661442 | E072 | 43794 |
chr8 | 58660414 | 58661442 | E073 | 43794 |
chr8 | 58660414 | 58661442 | E074 | 43794 |