rs7012929

Homo sapiens
T>G
None
Check p-value
SNV (Single Nucleotide Variation)
G=0160 (4686/29118,TOPMED)
G=0125 (3568/28478,GnomAD)
G=0189 (946/5008,1000G)
G=0058 (225/3854,ALSPAC)
G=0047 (175/3708,TWINSUK)
chr8:100799769 (GRCh38.p7) (8q22.3)
AD
GWASdb2
1   publication(s)
See rs on genome
21 Enhancers around
0 Promoter around

Genomic Coordinates

Sequence Name Change(s)
GRCh38.p7 chr 8NC_000008.11:g.100799769T>G
GRCh37.p13 chr 8NC_000008.10:g.101811997T>G

Population Frequency

Study Population Group Sample # Ref Allele Alt Allele
1000GenomesAfricanSub1322T=0.704G=0.296
1000GenomesAmericanSub694T=0.790G=0.210
1000GenomesEast AsianSub1008T=0.711G=0.289
1000GenomesEuropeSub1006T=0.948G=0.052
1000GenomesGlobalStudy-wide5008T=0.811G=0.189
1000GenomesSouth AsianSub978T=0.930G=0.070
The Avon Longitudinal Study of Parents and ChildrenPARENT AND CHILD COHORTStudy-wide3854T=0.942G=0.058
The Genome Aggregation DatabaseAfricanSub8060T=0.736G=0.264
The Genome Aggregation DatabaseAmericanSub784T=0.820G=0.180
The Genome Aggregation DatabaseEast AsianSub1464T=0.708G=0.292
The Genome Aggregation DatabaseEuropeSub17878T=0.951G=0.048
The Genome Aggregation DatabaseGlobalStudy-wide28478T=0.874G=0.125
The Genome Aggregation DatabaseOtherSub292T=0.960G=0.040
Trans-Omics for Precision MedicineGlobalStudy-wide29118T=0.839G=0.160
UK 10K study - TwinsTWIN COHORTStudy-wide3708T=0.953G=0.047
PMID Title Author Journal
23743675A meta-analysis of two genome-wide association studies to identify novel loci for maximum number of alcoholic drinks.Kapoor MHum Genet

P-Value

SNP ID p-value Traits Study
rs70129294.52E-05alcohol consumption23743675

eQTL of rs7012929 in Brain tissues (GTEx Analysis Release V7)

Position (v37) eGene GeneID Variant p-value TSS Tissue
There is no eQTL annotation for this SNP

meQTL of rs7012929 in Fetal Brain

Probe ID Position Gene beta p-value
There is no meQTL annotation for this SNP

Genomic View

Chromatin Interaction

There is no significant Hi-C chromatin interaction data for this SNP.

Enhancer Annotation (GRCh37.p13)

Chromosome Start End Region Distance ( -/+ : Up/Downstream )
chr8101773554101775046E068-36951
chr8101847470101848214E06835473
chr8101762717101763214E071-48783
chr8101764400101764498E071-47499
chr8101764560101764751E071-47246
chr8101764770101764823E071-47174
chr8101803597101803661E072-8336
chr8101803758101804338E074-7659
chr8101804391101804510E074-7487
chr8101847470101848214E07435473
chr8101848259101848339E07436262
chr8101859230101859295E07447233
chr8101775773101775823E081-36174
chr8101775832101775882E081-36115
chr8101775951101776079E081-35918
chr8101803597101803661E081-8336
chr8101803758101804338E081-7659
chr8101804391101804510E081-7487
chr8101851627101851825E08139630
chr8101851845101851917E08139848
chr8101775334101775644E082-36353