rs7018922

Homo sapiens
T>C
None
Check p-value
SNV (Single Nucleotide Variation)
T==0289 (8669/29936,GnomAD)
T==0345 (10072/29118,TOPMED)
T==0335 (1680/5008,1000G)
T==0227 (873/3854,ALSPAC)
T==0213 (788/3708,TWINSUK)
chr9:1230619 (GRCh38.p7) (9p24.3)
AD
GWASdb2
1   publication(s)
See rs on genome
21 Enhancers around
0 Promoter around

Genomic Coordinates

Sequence Name Change(s)
GRCh38.p7 chr 9NC_000009.12:g.1230619T>C
GRCh37.p13 chr 9NC_000009.11:g.1230619T>C

Population Frequency

Study Population Group Sample # Ref Allele Alt Allele
1000GenomesAfricanSub1322T=0.585C=0.415
1000GenomesAmericanSub694T=0.200C=0.800
1000GenomesEast AsianSub1008T=0.239C=0.761
1000GenomesEuropeSub1006T=0.212C=0.788
1000GenomesGlobalStudy-wide5008T=0.335C=0.665
1000GenomesSouth AsianSub978T=0.320C=0.680
The Avon Longitudinal Study of Parents and ChildrenPARENT AND CHILD COHORTStudy-wide3854T=0.227C=0.773
The Genome Aggregation DatabaseAfricanSub8716T=0.531C=0.469
The Genome Aggregation DatabaseAmericanSub836T=0.180C=0.820
The Genome Aggregation DatabaseEast AsianSub1616T=0.265C=0.735
The Genome Aggregation DatabaseEuropeSub18466T=0.183C=0.816
The Genome Aggregation DatabaseGlobalStudy-wide29936T=0.289C=0.710
The Genome Aggregation DatabaseOtherSub302T=0.240C=0.760
Trans-Omics for Precision MedicineGlobalStudy-wide29118T=0.345C=0.654
UK 10K study - TwinsTWIN COHORTStudy-wide3708T=0.213C=0.787
PMID Title Author Journal
19581569Genome-wide association study of alcohol dependence.Treutlein JArch Gen Psychiatry

P-Value

SNP ID p-value Traits Study
rs70189229.63E-05alcohol dependence19581569

eQTL of rs7018922 in Brain tissues (GTEx Analysis Release V7)

Position (v37) eGene GeneID Variant p-value TSS Tissue
There is no eQTL annotation for this SNP

meQTL of rs7018922 in Fetal Brain

Probe ID Position Gene beta p-value
There is no meQTL annotation for this SNP

Genomic View

Chromatin Interaction

There is no significant Hi-C chromatin interaction data for this SNP.

Enhancer Annotation (GRCh37.p13)

Chromosome Start End Region Distance ( -/+ : Up/Downstream )
chr912026771202939E069-27680
chr912029851203065E069-27554
chr912026771202939E070-27680
chr912029851203065E070-27554
chr912031061203220E071-27399
chr912035901203668E071-26951
chr912026771202939E074-27680
chr912029851203065E074-27554
chr912031061203220E074-27399
chr912008431201271E081-29348
chr912013201201424E081-29195
chr912014661201571E081-29048
chr912026771202939E081-27680
chr912029851203065E081-27554
chr912031061203220E081-27399
chr912537541253900E08123135
chr912540381254112E08123419
chr912541801254366E08123561
chr912026771202939E082-27680
chr912029851203065E082-27554
chr912031061203220E082-27399