rs7042916

Homo sapiens
G>A / G>T
None
Check p-value
SNV (Single Nucleotide Variation)
A=0022 (666/29906,GnomAD)
A=0024 (120/5008,1000G)
A=0001 (3/3854,ALSPAC)
A=0001 (3/3708,TWINSUK)
chr9:81284080 (GRCh38.p7) (9q21.31)
AD
GWASdb2
1   publication(s)
See rs on genome
0 Enhancer around
0 Promoter around

Genomic Coordinates

Sequence Name Change(s)
GRCh38.p7 chr 9NC_000009.12:g.81284080G>A
GRCh38.p7 chr 9NC_000009.12:g.81284080G>T
GRCh37.p13 chr 9NC_000009.11:g.83898995G>A
GRCh37.p13 chr 9NC_000009.11:g.83898995G>T

Population Frequency

Study Population Group Sample # Ref Allele Alt Allele
1000GenomesAfricanSub1322G=0.916A=0.084
1000GenomesAmericanSub694G=0.990A=0.010
1000GenomesEast AsianSub1008G=1.000A=0.000
1000GenomesEuropeSub1006G=0.999A=0.001
1000GenomesGlobalStudy-wide5008G=0.976A=0.024
1000GenomesSouth AsianSub978G=1.000A=0.000
The Avon Longitudinal Study of Parents and ChildrenPARENT AND CHILD COHORTStudy-wide3854G=0.999A=0.001
The Genome Aggregation DatabaseAfricanSub8702G=0.924T=0.000
The Genome Aggregation DatabaseAmericanSub838G=1.000T=0.00,
The Genome Aggregation DatabaseEast AsianSub1614G=1.000T=0.000
The Genome Aggregation DatabaseEuropeSub18450G=0.999T=0.000
The Genome Aggregation DatabaseGlobalStudy-wide29906G=0.977T=0.000
The Genome Aggregation DatabaseOtherSub302G=1.000T=0.00,
UK 10K study - TwinsTWIN COHORTStudy-wide3708G=0.999A=0.001
PMID Title Author Journal
20201924Genome-wide association study of alcohol dependence implicates a region on chromosome 11.Edenberg HJAlcohol Clin Exp Res

P-Value

SNP ID p-value Traits Study
rs70429160.000101alcohol dependence20201924

eQTL of rs7042916 in Brain tissues (GTEx Analysis Release V7)

Position (v37) eGene GeneID Variant p-value TSS Tissue
There is no eQTL annotation for this SNP

meQTL of rs7042916 in Fetal Brain

Probe ID Position Gene beta p-value
There is no meQTL annotation for this SNP

Genomic View

Chromatin Interaction

There is no significant Hi-C chromatin interaction data for this SNP.